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SCNpilot_expt_1000_bf_scaffold_18092_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(3983..4249)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW23_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 88.0
  • Bit_score: 169
  • Evalue 1.80e-39
transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 88.0
  • Bit_score: 169
  • Evalue 5.80e-40
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGB75437.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 88.0
  • Bit_score: 169
  • Evalue 2.60e-39

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
GAAGTTGGCATGAGTCCGTCGAGCCTGCATGAGCATTTTCGCGCTGTGACGGCGATGACACCGTTGCAATTCCAGAAGCAGCTAAGGTTGCAGGACGCGCGCAGCCTGATGCTGGTCCAGGACATCGATGCCACGACAGCCGCCTTCCGCGTGGGTTACGAAAGCCCGTCGCAGTTCACTCGCGAATATCGCCGCCACTTTGGAGAACCGCCGGCACGCGACATAGCCCGCTTGCGGGCTTTGCCAAGCTTGGCGGTGATAGTTTGA
PROTEIN sequence
Length: 89
EVGMSPSSLHEHFRAVTAMTPLQFQKQLRLQDARSLMLVQDIDATTAAFRVGYESPSQFTREYRRHFGEPPARDIARLRALPSLAVIV*