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SCNpilot_expt_1000_bf_scaffold_19187_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(2230..3258)

Top 3 Functional Annotations

Value Algorithm Source
Ribose ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JN28_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 350.0
  • Bit_score: 600
  • Evalue 9.50e-169
  • rbh
ribose ABC transporter; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 350.0
  • Bit_score: 600
  • Evalue 3.00e-169
  • rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KEA03517.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 350.0
  • Bit_score: 600
  • Evalue 1.30e-168

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGTCAGTCACGAACATCACAGATAAAAAGCCAATCGCGAACGGACAGCGGCGGAACTTCAGTCTCGTGCGGCTGATCCTGGAAGGGCGCGCCTTCTTCGCGCTGATCGTCATCATCGCGGTCTTCTCCTTCCTGTCGCCCTACTACTTCTCGCTCAGCAACTTCCTGACCATGGCCTCGCATGTCGCGATCTTCGGCATTCTTGCCATAGGCATGCTGCTGGTCATCCTGAACGGCGGCATCGATCTGTCGGTCGGCTCGACGCTTGGCCTCGCCGGCTGTATCGCCGGCTTCCTGATGCAGGGCGTCACGCTTTCGAGCCTCGGCGTCATTCTCTACCTGCCGGTCTGGGCCGTCGTCGTGGTGACCTGCGTGCTTGGCGGCGTGGTCGGAGCGGTCAACGGCGTGCTAATTGCCTATCTGCGCGTGCCGGCCTTCGTCGCTTCGCTCGGCGTGCTCTATGTTGCCCGCGGCATCGCGTTGCNNNNNNNNNNNNNNCATGCGGAACTCGGCAATACTGGCTTCAACTGGCTGGGCTTCAACCGCCTCGCCGGCGTTCCGATCGGTGTGATCGTGCTTGCCGTGCTTGCCATCATCTGCGGCCTCGTTCTCAGCCGCACGGCGTTCGGCCGCTGGCTTTATGCCTCCGGCGGCAACGAGCGCGCCGCTGATCTTTCCGGCGTCCCCGTCAAGCGCGTCAAGATCATCGTCTATGTCCTGTCGGGCGTCTGCGCCGCCATCGCCGGCCTGGTGCTGTCCTCGCAGCTGACATCGGCTGGCCCGAACGCCGGCACCAGCTACGAGCTGACGGCGATTGCCGCAGTCGTCATCGGCGGTGCGGCATTGACCGGCGGCCGCGGTACGGTGCGCGGCACCATGCTTGGCGCCTTCGTCATCGGCTTTCTGGCGGACGGCCTCGTCATCATCGGCGTGTCCTCCTACTGGCAGACGGTCTTTACCGGCGCCGTCATCGTGCTCGCCGTGCTGATGAACAGCATCCAGTACGGACGCCGGACCAAATCGAGCTGA
PROTEIN sequence
Length: 343
MSVTNITDKKPIANGQRRNFSLVRLILEGRAFFALIVIIAVFSFLSPYYFSLSNFLTMASHVAIFGILAIGMLLVILNGGIDLSVGSTLGLAGCIAGFLMQGVTLSSLGVILYLPVWAVVVVTCVLGGVVGAVNGVLIAYLRVPAFVASLGVLYVARGIALXXXXXHAELGNTGFNWLGFNRLAGVPIGVIVLAVLAIICGLVLSRTAFGRWLYASGGNERAADLSGVPVKRVKIIVYVLSGVCAAIAGLVLSSQLTSAGPNAGTSYELTAIAAVVIGGAALTGGRGTVRGTMLGAFVIGFLADGLVIIGVSSYWQTVFTGAVIVLAVLMNSIQYGRRTKSS*