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SCNpilot_expt_1000_bf_scaffold_19262_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 163..1044

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF122 RepID=J3BFS0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 293.0
  • Bit_score: 586
  • Evalue 1.20e-164
  • rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJL50581.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 293.0
  • Bit_score: 586
  • Evalue 1.70e-164
dppCch3; dipeptide ABC transporter; K02034 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 293.0
  • Bit_score: 566
  • Evalue 7.00e-159
  • rbh

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGCCGATATGAAGATGCTTGATGCCTCCGACCGCGCCCTGAGCACCGGCTACATGATGTGGTACCGCTTCAGCCGCAATCCAGCTGCGGTGATCGGTACGCTGATCCTGATTTCCGTTGTCGTGCTCGCGGTTTTTGCGCCGTGGCTCACGCCCTATCCGAAGCATGTGGGCGCCGTCGTCGATTTTCGTGCACGGCACGTTGCGCCGGATGCCACCCATTGGTTCGGCACCGACAAGGTGGGCCGGGATATCTTTTCCCGCACCGTTTTCGGCATGCGCGTCTCCCTGCTTCTCGTCATCGGCGTGCTCGGCATTTCCGTGCCGATCGGCACCGTGCTCGGCCTCATCGCCGGCTACTTCGGCGGCTGGGTCGAAAAGATCATCACCGGTCTGACGAACGTCATGCTGGCAATGCCGCCGCTCGTTATGGCGCTTGCCGTGTCGAACCTGCTAGAGCCGAACCTGATGAACGCGATGATCGCCATCACGCTGCTATGGTGGACGTGGCATGCGCGGCTGATCTACTCCGTTTCGAAGTCGATCGCGTCCGAAGATTATATCGAGGCGGCCCGCCTTGCCGGCGCCGGGCCGATGCACATCCTCTTCCGCGAGATCCTGCCCAATTGTGTCGCGGTGATTTCCGTCAAGACGACGCTGGATGCAGCCTTCGTCATCCTGTTTGGCGCCACTCTCAGCTTCCTCGGCTTCGGCGTGAAGCCGCCCATTCCGGACCTCGGCTCCATGGTCGCCGATGGTCGCCAGTTCATGCCCGATTACTGGTGGGAAGTCGTGTGCCCCGGTGCTGCGGTCTTCTACGTGACGCTCGGCTTCAATCTGTTGGGCGATGGCTTGCGCGACATGTTTGATGTGGAGAGCTAA
PROTEIN sequence
Length: 294
MADMKMLDASDRALSTGYMMWYRFSRNPAAVIGTLILISVVVLAVFAPWLTPYPKHVGAVVDFRARHVAPDATHWFGTDKVGRDIFSRTVFGMRVSLLLVIGVLGISVPIGTVLGLIAGYFGGWVEKIITGLTNVMLAMPPLVMALAVSNLLEPNLMNAMIAITLLWWTWHARLIYSVSKSIASEDYIEAARLAGAGPMHILFREILPNCVAVISVKTTLDAAFVILFGATLSFLGFGVKPPIPDLGSMVADGRQFMPDYWWEVVCPGAAVFYVTLGFNLLGDGLRDMFDVES*