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SCNpilot_expt_1000_bf_scaffold_21309_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(1..537)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 179.0
  • Bit_score: 349
  • Evalue 3.70e-93
dxs; 1-deoxy-D-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 179.0
  • Bit_score: 347
  • Evalue 3.10e-93
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V787_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 179.0
  • Bit_score: 349
  • Evalue 2.60e-93

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCCAAAGACGCCACTGCTGGACCAGGTCCAATATCCTTCCGACCTGCGAAAGCTGGAGGACCGGGAATTGCCGCAGCTCGCCCGCGAAGTGCGCGACGAGATGATCGATGCGGTATCGCGCACCGGCGGACATCTCGGTGCCGGCCTCGGCGTCGTCGAGCTGACGATCGCCATCCACAGCGTCTTCGATACACCGAACGATCGCCTGATTTTCGATGTCGGGCATCAGTGTTATCCGCACAAGATCCTGACCGGGCGTCGCGACCGAATCCGCACGCTGCGCCAGGAAGGCGGCCTTTCCGGTTTCACGCGCCGGGCCGAGAGTGAATACGACCCCTTCGGCGCCGCACATTCATCGACCTCCATCTCCGCCGGTCTCGGCATGGCGGTGGCTGCCGAGCTCGACAAGACCGACCGCCGCGTCATCGCCGTCATCGGCGACGGCGCGATGTCGGCCGGCATGGCCTATGAAGCCCTGAACAATGCCGGCGCGCTCGATGCGCGGCTGATCGTTATCCTCAACGACAACGACATG
PROTEIN sequence
Length: 179
MPKTPLLDQVQYPSDLRKLEDRELPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVFDTPNDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAAELDKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDM