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SCNpilot_expt_1000_bf_scaffold_22946_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(4805..5152)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 110.0
  • Bit_score: 203
  • Evalue 2.10e-49
twitching motility protein PilT n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003805DFA similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 115.0
  • Bit_score: 204
  • Evalue 5.10e-50
stbB; Plasmid stability protein StbB, putative; K07062 similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 108.0
  • Bit_score: 171
  • Evalue 2.00e-40

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Taxonomy

Mesorhizobium sp. LSHC422A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
CTTTTCATTGCTTCGCTTACCGTCGCCGAAATCCATCGAGGCATCTTGGAGAAGCCGAAAGGCAAGAAGCGTAGCAGCCTTGAAACTTGGTTCCTCGGCTCAGAAGGGCCGCAAGCGCTGTTCGCTGGCCGCATCCTATCGTTCGACGACAAGGCGGGTTTGATCTGGGCGCGGCTGATGGCCAACGGTAAAGCCAAGGGCCGTTCGCGAAGCGCGCTAGACACAATCATTGCCGCCGTCGCCGAAGCCAACGACTGCATCGTCGTGACCGACAATGAAAAGGATTTCGAGGACGTTCAGATTATCAACCCGCTCCGTAGCTCTGAGAGCTGGGAGGTGGGTAAGTGA
PROTEIN sequence
Length: 116
LFIASLTVAEIHRGILEKPKGKKRSSLETWFLGSEGPQALFAGRILSFDDKAGLIWARLMANGKAKGRSRSALDTIIAAVAEANDCIVVTDNEKDFEDVQIINPLRSSESWEVGK*