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SCNpilot_expt_1000_bf_scaffold_23698_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 981..1247

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M3Q3_RHIL3 similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 88.0
  • Bit_score: 140
  • Evalue 9.10e-31
XRE family transcriptional regulator {ECO:0000313|EMBL:KEA04288.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 87.0
  • Bit_score: 147
  • Evalue 8.00e-33
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 88.0
  • Bit_score: 140
  • Evalue 2.90e-31

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGAACGTGCGGCAGACCATCGGCTGGAATCTAAGACGACTTCGGGTCGCCAAAGGACTGTCGCAGGAGCGGCTGGCGTTCGAGGCCGGAATTGACCGCTCTTACGTTGGACGCGTTGAAAGAGGCACAGAAAACGTCACTGTAGGGACCCTTGAAGCCCTCGCAAAAGTCTTGTCTGTGAATGTTTCTGAGCTGTTCGCGGAAATTAACCCCGAGAACAAGAAGCCTCCGGGTCTTCGCTCAGGCCGCAAGCAAAAGGCGCCCTAA
PROTEIN sequence
Length: 89
MNVRQTIGWNLRRLRVAKGLSQERLAFEAGIDRSYVGRVERGTENVTVGTLEALAKVLSVNVSELFAEINPENKKPPGLRSGRKQKAP*