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SCNpilot_expt_1000_bf_scaffold_23758_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(1735..3162)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLJ4_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 471.0
  • Bit_score: 793
  • Evalue 1.10e-226
  • rbh
transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 471.0
  • Bit_score: 793
  • Evalue 3.30e-227
  • rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGB72087.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 471.0
  • Bit_score: 793
  • Evalue 1.50e-226

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGGTAGCGGTGGCGCAGTGGCAGGCACTCGATCGGACTTCGGGTGACCTGGAGGGGCAGGTCTATCGCCTGATGCGCGACCGCATCCTGCACGGACAGATGCCGGCAGGGCAGCGCGTGCCGTCGACAAGGATGATGGCGCTCTCGCTTGGCGTTGCACGATCGACCGTCGTCAATGCCTATGATCGTTTGAAGGCTGAAGGCTACCTGCAATCGACGACCGGCGCGGCGACGCGCGTCGCGGCTTTCCCGACGACGTCATTGTCCGGACAGGCCGCACCACCGCCGCCAAATCTGCCGCGCGTCACGGAATTCAAGACCGGGGGGCTGTACGAACCCGGAGTGCCTGACGTTTCGACCTTTCCCCATGCGGCCTGGGCACGCTGTCTCGGCGCCCGGGGCCGCTCTTTGCGGGTGCATGATCTCGGTTATCGCGACCACGGCGGTGTCCAGGAGTTGCGCGAAGCCATCCTCGATCACATCGCCGCGACGCGCGGTGTGATCGCTCGTCCCGAACAGATCCTGATCATGCCGTCGACGGGAGCAGCGATCGGGTTGCTTGCGAGCGCCCTGATCCGTGCCGGCGATCCGGGTGGCGATGTGGTCTGGATGGAGGAGCCGGGTTATGCCAGCGCGCAAGCGATCCTGCGCATGGCGGGGGCCAGCCTCGTGCCGGTGCCTTGCGATACCGAGGGCATCGATATCACGCGGGGTACCGGGCCATCGCCGCGGTTGATCTACGTCACCCCGTCGCATCAATATCCGACCGGCGTGACCATGAGCCTGTCCCGCCGTCTCGCCTTGCTCGAATTTGCCCGGGCGACCGGCGCGATCGTGCTGGAAGACGATTACGACAGCGAGTTCCAGTATGCGTCGCGCCCGATCGCGGCCCTGCAAGGCATCGACCGCGGCGAGGTGGTCGCTTATGTCGGGACGTTCTCGAAAACGCTCGCGCCCGGCCTGCGCGTCGCCTATGCCGTCGTGCCCTCCCGGCTCTTGGCAGCGACGGAGGCGGCACAACGGCTCAGGGGTGCAATCGTGCCCGTTCATATCCAGGCGGCTCTTGCCGATTTCATGCGCGAGGGTCGGTTTCGCGCGCATTTGAGACACATGAACGCGATTTATGCCGAACGCATGGCGGCGACCGTCGAGGCACTCAATCGACATTGCGGCTCCTGGCTGGATGTCGGAGCGGGCAGCGGCGGGCTGCAATTGGCAAACTGGTTCCGCGACGTAAAGACCGATGACGTTGCCACGGTGCGGACCATCAATTCCAATGGTTTCGCTGTGAGGCCGATATCGGCGCTGTATCTCGGTCCGGCGCGACCCGGGCTGTTGCTCGGCATCGCCAGCATGGAAGCCAAGGCCGCGGATGCGGCGGCCGCCAGAATTGCCAGGCTGCTTGCGATGGTGCCCGTCAACGCCTGA
PROTEIN sequence
Length: 476
MVAVAQWQALDRTSGDLEGQVYRLMRDRILHGQMPAGQRVPSTRMMALSLGVARSTVVNAYDRLKAEGYLQSTTGAATRVAAFPTTSLSGQAAPPPPNLPRVTEFKTGGLYEPGVPDVSTFPHAAWARCLGARGRSLRVHDLGYRDHGGVQELREAILDHIAATRGVIARPEQILIMPSTGAAIGLLASALIRAGDPGGDVVWMEEPGYASAQAILRMAGASLVPVPCDTEGIDITRGTGPSPRLIYVTPSHQYPTGVTMSLSRRLALLEFARATGAIVLEDDYDSEFQYASRPIAALQGIDRGEVVAYVGTFSKTLAPGLRVAYAVVPSRLLAATEAAQRLRGAIVPVHIQAALADFMREGRFRAHLRHMNAIYAERMAATVEALNRHCGSWLDVGAGSGGLQLANWFRDVKTDDVATVRTINSNGFAVRPISALYLGPARPGLLLGIASMEAKAADAAAARIARLLAMVPVNA*