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SCNpilot_expt_1000_bf_scaffold_27241_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 214..417

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L35 n=5 Tax=Rhizobium/Agrobacterium group RepID=RL35_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 135
  • Evalue 2.20e-29
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 135
  • Evalue 7.10e-30
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 135
  • Evalue 3.10e-29

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGCCCAAGATGAAGACGAAGTCCTCTGCCAAGAAGCGGTTCAAGATCACCGCGACCGGCAAGGTCAAGGCAGCCGCTGCTGGCAAGCGCCACGGCATGATCAAGCGTAGCAACAAGTTCATTCGCGATGCTCGCGGCACCATGGTTCTCGCAGAACCGGATGGCCGTAAGGTTATCAAGAACTACTTGCCGAACGGTCTCTAA
PROTEIN sequence
Length: 68
MPKMKTKSSAKKRFKITATGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLAEPDGRKVIKNYLPNGL*