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SCNpilot_expt_1000_bf_scaffold_27308_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(1..861)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJZ5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 287.0
  • Bit_score: 520
  • Evalue 1.40e-144
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:EYR83018.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 287.0
  • Bit_score: 520
  • Evalue 1.90e-144
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 288.0
  • Bit_score: 503
  • Evalue 5.40e-140

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGGTGAAGCTAAGACGTCTTCTCATGGGCGCGGCCTTCGCGCTTGCTGCATTTCCGGCGATGGCCGGCGAGCTGACATTCTGGCATGCCTATGCTGGCCAGCAGGACAAGGTCGATTTCATCAATTTCGCGCTGGGTGAATTCGCCAAGAAGCATCCGGACATCAAGCTTGATGTCGTGGCCGCCGAGCAGTCCGCTTATAAGACCAAGCTCAACACGGCGATGGCGTCCGGCAATCCTCCCGACGTGTTCTACACCTTGCCTGGCGGCTTCTTGAACGCCTTCGTCAAGGGCGGACAGATGTATGCGCTTGATCAGGATCTCGCCAAGGACGGCTGGCGCCAGAGCTTCCTCGAAAGCGCCATTGCCCAGACGAGCAAGGATGGTCATACCTACGCCGTGCCTGTCGACGTCGACTCCGTCGTCTTCTGGTACAACAAGGCGCTGTTTGCCGAAAAGGGCTGGACGGTTCCCAAGACCTATGACGAGCTGATGGCTTTGGCCGAAAAGATCAAGGCCGACGGCGAAGTGCCCTTTGCGCTTGGCAACAAGGATTCCTGGCCGGCCACGTTCTGGTTTCAGTATCTGGAAATGCGCCTGAAGGGCTCGGGCGTGGTCGCATCCTTCGTCAATGGCGATGCCAAGGCGACATTCGGTCCCGAAGGCGAAAAGGCTTTCGAAAGGGTCGCAGAGATCGCCAAGAAGCAATATTTTCCGACCGGTTTCAACGGCATGAGCGACCAGGAAGCCAACATGCTGTTCCTGAACGGCCAGGCCGCAATGATGCTGAACGGCACGTGGCAGATCGGCGCCTCCGCCGATGCACCCGAAGGTTTCGAGCTTGCCTCCTTCGCTTTCCCC
PROTEIN sequence
Length: 287
MVKLRRLLMGAAFALAAFPAMAGELTFWHAYAGQQDKVDFINFALGEFAKKHPDIKLDVVAAEQSAYKTKLNTAMASGNPPDVFYTLPGGFLNAFVKGGQMYALDQDLAKDGWRQSFLESAIAQTSKDGHTYAVPVDVDSVVFWYNKALFAEKGWTVPKTYDELMALAEKIKADGEVPFALGNKDSWPATFWFQYLEMRLKGSGVVASFVNGDAKATFGPEGEKAFERVAEIAKKQYFPTGFNGMSDQEANMLFLNGQAAMMLNGTWQIGASADAPEGFELASFAFP