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SCNpilot_expt_1000_bf_scaffold_27308_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 964..1611

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EI13_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 201.0
  • Bit_score: 343
  • Evalue 1.70e-91
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EYR83019.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 201.0
  • Bit_score: 343
  • Evalue 2.40e-91
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 317
  • Evalue 4.20e-84

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGCTAACTCTCAACCCGACAGCGTCTGCCAGCGAAAGAACCGTCATGACCCTTGACCTGCATGGTCCAGTGAACCCAGCCAGCAGCCGGCTGCGAAGCGTCCTGCCGAAATTGTCGGAGTCTGAGCGGCGCGTTGCGCTTTGGGTCCTGGAGAATATCAACGCCACCATCCGCCATTCGATGTCGGCCATCGCCCAGGCAACCGATGTCAGCGATACGACCGTGTTGCGCATGTGTCGCACGGCCGGTTTCGAAGGTTTTACAGACCTTAAGCTAGCGCTGGCGCAGGAACCGCGCGATATGCGCGATGCGACCGGCAAGGAGCCGGATGCCACCGATCTCCACGCCGCAGTTCGCCTGTTTCGCGCGGTCGCTCAGGCCATCAGCGACACGCAGGGCGTATTGAACGAGGCGACGTTTGCAAAGGCACTCGACCTGATCGCCGGAGCACGACACATTCTGGTCGGCGGCGTCGGCGGCTCCGGCATTGTCGCTCAGGCTTTCTACCAGCGCTGCATCCGTCTTGGATTGCGCTGCGACGCTCCGGTCGACTCGCAACTACAGATCATGCATTCGGCACTCGTCGGCCCGGAAGACCTGGTCGTGGTCATCTCTTATTCCGGCATTACCAGCGACCCGGTTCTCGTT
PROTEIN sequence
Length: 216
MLTLNPTASASERTVMTLDLHGPVNPASSRLRSVLPKLSESERRVALWVLENINATIRHSMSAIAQATDVSDTTVLRMCRTAGFEGFTDLKLALAQEPRDMRDATGKEPDATDLHAAVRLFRAVAQAISDTQGVLNEATFAKALDLIAGARHILVGGVGGSGIVAQAFYQRCIRLGLRCDAPVDSQLQIMHSALVGPEDLVVVISYSGITSDPVLV