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SCNpilot_expt_1000_bf_scaffold_26153_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 2507..3172

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UQZ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 221.0
  • Bit_score: 413
  • Evalue 1.40e-112
  • rbh
LacI family transcriptional regulator/periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 221.0
  • Bit_score: 413
  • Evalue 5.70e-113
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:ENN84130.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 221.0
  • Bit_score: 413
  • Evalue 2.00e-112

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGAACGATATCCGCTCCAAACGCATCCGACAGGCCGACATTGCTGCCGCAGCCGGCGTCTCCGTTTCCACCGTGTCGCGTGTACTCACCAACGAACCCGGCATCAGCGAGACGATCCGCCAGCACATCTTCAAGGTGGCGAGCGATCTCGGCTATCCGTTGAAGACAACAACGGAAGCCGAAACCGGCGGCCTCGCATTGATTGCCAGCGACAGCGTCACGGGCGGCCTGAGCATTTTCTACGAAGGCATTCTGGAAGGTCTGCGCGCTGGGGCTGCCGAGCGCGGCATGCGCTTCGACATCCGCCTTGTCCGGGAAGCGAGGACGGAGCCGGACCTGGTAAAGGAATATCTGCAGACCGCCGGCGCCGAAGGCCTGTTTCTCGTCGGTATCGACCCCTCTGAAGAGCTGTGCCGCTGGCTCGAGGCAAGCGGCACGCCAACCGTGCTCGTCAACGGCACCGACCCGAAGCTGCGCTTCGATGGCGTTTCGCCCTCGAATTTCTTCGGCGCCTATAATGCGACGCGCCGTCTGATCGATGCCGGCCACCGCCGCATTCTGCATCTGACTGGCTCGCACCGCCAGACGATCCGCGAGCGCATCCGTGGCTTCGAGGCGGCAGTCGCTTCGGTGGAAGGCGCCGAGGGCCGGATCGTGCCGATGTGA
PROTEIN sequence
Length: 222
MNDIRSKRIRQADIAAAAGVSVSTVSRVLTNEPGISETIRQHIFKVASDLGYPLKTTTEAETGGLALIASDSVTGGLSIFYEGILEGLRAGAAERGMRFDIRLVREARTEPDLVKEYLQTAGAEGLFLVGIDPSEELCRWLEASGTPTVLVNGTDPKLRFDGVSPSNFFGAYNATRRLIDAGHRRILHLTGSHRQTIRERIRGFEAAVASVEGAEGRIVPM*