ggKbase home page

SCNpilot_expt_1000_bf_scaffold_26185_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 1222..1671

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000366928C similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 140.0
  • Bit_score: 237
  • Evalue 9.30e-60
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGE02024.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 150.0
  • Bit_score: 227
  • Evalue 1.00e-56
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 149.0
  • Bit_score: 216
  • Evalue 5.30e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGATGCGGTCCCTTTTGTCTGCTGCTCGAGCAGCATTGATTGTCGTTTCGGCTCTGTTGCCAGGAAAAGCCTGGGCGACCGAGGCGACCACCTACCCCATCACCATCAAGCATGCCTTTGGCACGACGGTCATCGAAAAGAAGCCGGTACGGATCGCAACCGTTGAATGGGCAAATCATGAGGTGCCGCTAGCGCTGGGTGTCGTTCCGGTCGGCATGGCGCGCGCCAATTTCGGCGATGATGACGGTGACGGCATCCTGCCGTGGAACCTTGCGCGGCTGAAGGAACTGCATGCCAAGACGCCGGTCCTGTTCGATGAAGGCGACGGCATTGATTTCGAGGCGGTTGCCGCCACACAGCCCGACGTCATTCTGGCCGCCTATTCAGGATTGAGCCGCGCCGCCTACGAAACGTTGAGCCAGATCGCGCCGGTGGTGGCCTATCCGGAG
PROTEIN sequence
Length: 150
MMRSLLSAARAALIVVSALLPGKAWATEATTYPITIKHAFGTTVIEKKPVRIATVEWANHEVPLALGVVPVGMARANFGDDDGDGILPWNLARLKELHAKTPVLFDEGDGIDFEAVAATQPDVILAAYSGLSRAAYETLSQIAPVVAYPE