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SCNpilot_expt_1000_bf_scaffold_27833_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 689..1351

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate binding protein (Sugar) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5P4_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 220.0
  • Bit_score: 410
  • Evalue 1.50e-111
  • rbh
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAJ97087.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 220.0
  • Bit_score: 411
  • Evalue 9.70e-112
ABC transporter substrate binding protein (sugar); K02027 multiple sugar transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 220.0
  • Bit_score: 410
  • Evalue 4.80e-112
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGATGGTCATGGGCGCCGGCGACCAGATGCTGAACGCCAAGGCCACCGGCATCGGCTTTGACGACAAGGCAGGGCTCGAGGCGCTGCGCATCACCCAGGACATAGCCGTCAAGACCGGCATGTCTGTCTATGCCGATCCGAAGCCGGCGCAGCAGCAGTTCTTTGCCGGCAAGATCGGCATGGTAGTTGAATCGCCTTCCGACCTCGTCGCCTACGAGACCGCGATCGGCGACCGTTTCACCATGCGCACCGTCCGCTTCCCACTGATCGACGCCCAGAGGGGTGGTCTGCCGGCCGGCGGCAACGCGCTGATGGTGCTTGCCAAGGACGCCGCCAGGCGCATCGCCGCCTGGGAATTCATCAAATACATGACCAGCGCTGCGGTTCAGGCCGAAGTGTCGAAGGCCAGCGGCTACATGCCGGTCAACGTCCAGGCCGCCAAGGCGCTCGAAGGCTTCTACGCCCAGCACCCGAATTTCCAGACCGTGTTCAAATCGATGAATGCCGCCATGCCGTGGTTCGCCTATCCGAACAACACCGCTGACGGCGTCTGGAAGGGCGTGGCACCGATCCTCGACCAGCTGCAGCGTGGCAAGATCACCCCGGATGCCGCCCTGCCGAAGATCCGCGAGCATGTCGCCGGCGTGATGGCGGCGCAGTAA
PROTEIN sequence
Length: 221
MMVMGAGDQMLNAKATGIGFDDKAGLEALRITQDIAVKTGMSVYADPKPAQQQFFAGKIGMVVESPSDLVAYETAIGDRFTMRTVRFPLIDAQRGGLPAGGNALMVLAKDAARRIAAWEFIKYMTSAAVQAEVSKASGYMPVNVQAAKALEGFYAQHPNFQTVFKSMNAAMPWFAYPNNTADGVWKGVAPILDQLQRGKITPDAALPKIREHVAGVMAAQ*