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SCNpilot_expt_1000_bf_scaffold_27433_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 2322..2528

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein CspA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWR0_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 68.0
  • Bit_score: 133
  • Evalue 6.60e-29
cspA1; cold-shock protein CspA similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 68.0
  • Bit_score: 133
  • Evalue 2.10e-29
Cold-shock protein CspA {ECO:0000313|EMBL:AGB75682.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 68.0
  • Bit_score: 133
  • Evalue 9.30e-29

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGCCAACTGGCACGGTTAAGTTTTTCAACACCGATAAGGGCTTTGGCTTCATTACGCCGGAAAGCGGAGGACCTGACGTTTTCGTTCACGTCTCCGCCCTGCAATACGGCAATGTGCTCAGAGAGGGACAATCCGTTTCCTACGATCTGGGTCAGGACCGGAAGACCGGCAAGTCAAAGGAGGCGGAAAACGTCAGACCGCTCTAA
PROTEIN sequence
Length: 69
MPTGTVKFFNTDKGFGFITPESGGPDVFVHVSALQYGNVLREGQSVSYDLGQDRKTGKSKEAENVRPL*