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SCNpilot_expt_1000_bf_scaffold_29611_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 128..511

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 126.0
  • Bit_score: 219
  • Evalue 3.10e-54
Ribonuclease VapC n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PVF9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 126.0
  • Bit_score: 219
  • Evalue 2.20e-54
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 124.0
  • Bit_score: 212
  • Evalue 8.60e-53

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Taxonomy

Rhizobium mesoamericanum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGATTGCAGTTGATACATCCGCTCTCATGGCAATTGTGCTCGACGAGCCGCAGGGCGAAGCTTGCATGGCGGCAATCGAAGAGGCCGATCGACTGTTGATTTCCGTCGGCACCGTCGCTGAGGCCCTCATCGTCGCCTCACGACGCAATGTCGGCGAAGAAGTCAACTTACTCATTTCAGGCCTCGGCTTCGAGATCGTGTCCGTCACAGCTGCCGCCGCCCGTCGAGTGGCTCATGCCTACGGCCGATGGGGCAAGGGTGTTCATCCAGCTGGACTGAACTATGGCGATTGCTTTTCGTATGAAGTCGCCAAAGAGCACGATTGTCCTCTGCTTTATGTGGGCGAAGATTTCACGCAGACTGACGTTCGGCGGGCTCGTTAG
PROTEIN sequence
Length: 128
MIAVDTSALMAIVLDEPQGEACMAAIEEADRLLISVGTVAEALIVASRRNVGEEVNLLISGLGFEIVSVTAAAARRVAHAYGRWGKGVHPAGLNYGDCFSYEVAKEHDCPLLYVGEDFTQTDVRRAR*