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SCNpilot_expt_1000_bf_scaffold_29712_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(3..308)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane polysaccharide synthesis protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000370BED6 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 102.0
  • Bit_score: 148
  • Evalue 2.90e-33
polysaccharide biosynthesis GtrA-like protein similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 102.0
  • Bit_score: 146
  • Evalue 3.50e-33
Polysaccharide biosynthesis GtrA-like protein {ECO:0000313|EMBL:AGS24199.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 102.0
  • Bit_score: 146
  • Evalue 1.60e-32

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGATATTGTCGAAGGCAATCCGCTATGTGTTTACGGGAGGCTTGGCTTCCGTTGTCGATCTCGGGGGTTTTCGCGGTCTCTTGTTTATAAGCGTACCGCTCGGCTTTTCGGCGACCTCGAGCTGGTTGATCGCCGCCGCCGTCAATTACGGCCTCACCAGCCGTTATGTCTTCAAGCAGGCTGTCAGCCACAAGCGCGCTTCATTGTTTTTGGTTGGTGCGCTGTTGGGGCTGTCGATCAATGTCTGCATGACGGTATTGCTTGTGAGAAACTTCGAGATCCAACCCTTTTGGGCAAAATTCTTA
PROTEIN sequence
Length: 102
MILSKAIRYVFTGGLASVVDLGGFRGLLFISVPLGFSATSSWLIAAAVNYGLTSRYVFKQAVSHKRASLFLVGALLGLSINVCMTVLLVRNFEIQPFWAKFL