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SCNpilot_expt_1000_bf_scaffold_40201_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 1022..2050

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5B8D9 related cluster n=1 Tax=unknown RepID=UPI0003D5B8D9 similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 345.0
  • Bit_score: 617
  • Evalue 7.50e-174
Conjugal transfer protein TraI {ECO:0000313|EMBL:ETI62841.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 345.0
  • Bit_score: 617
  • Evalue 1.10e-173
trbI; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 345.0
  • Bit_score: 595
  • Evalue 9.60e-168

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Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
GTGAGCGAGACGGATCCTCGGAAAGAGGAAGAGCCGGATGACGATGCCCGGCCGCTGACCGGCGAGCCGGTCAGCCCCGCGGCGATGCGGCTGCGCGCGGAGCCGCCGCGCGTGACGCGGCTGTCGCGAAAGGTTCTCGCAGGCCTCGGCCTGGTCGCCAGCGTCGGGATCGGCGGCGCCCTCGTCTACGCGCTTCAGACCCGCGATGGCGGCCGGCCGAACGAGGAACTCTATTCGACCGAGAACCGTCCGACTGCGGACGGCATCGCCGGCCTGCCGCGTGACTATTCCGGCGTGCCCCAGCTCGGGCCGCCGCTGCCCGGCGATCTCGGCCGGCCGATGCTCGACGCCCAAAACCGCGGTCAACCCGTGCCGGCGCCTGGCGTCGCCGCCGCCAATCCCGGCCTCAGTGCCGAGGAGCAGCGCAGGCTTCAGGAGTTGGAATCGGCACGAACCGCGCGTCTGTTCGCCGCGACCGAGACCCATACGGCCAACGTGGCGCCAGCGGCGCCAGCCGGTACGGCGCCGTCGCCCATCCCGGACCTCACCACCCTCGGGCTCGCACCGGCGCCAGCGACGCCCACGGCCCAGGATCGTCAGAACGCTTTCCTCAACGCGGCCGCTGATCGCCGCACCGTCGCGCCCGATCGCGTCGCCGCGCCGGCATCGCCCAATATCCTTCAAGCTGGCGCCGTCATCCCAGCCGCGCTGATCACCGGTATCCGGTCCGATCTTCCTGGCCAGATCACCGCGCAGGTGACGGAGAACATCTATGACAGTCCGACCGGCCGCATCCTGCTCGTGCCGCAGGGCACGCGCGTCATCGGCCAATACGACAATAATGTGCAGTTTGGGCAGAGCCGCGTGCTGCTCGTCTGGAATCGGCTGATCTTCCCAAACGGTCGTTCAATCGTGCTGGAGCGCCAACCCGGTGCCGATGCCGAGGGCTATGCCGGCCTGCAAGATGGCGTCGACTATCACTGGTGGGATCTGGCCAAGGCCGCCGGCCTGTCGACGCTCCTCAGCGTC
PROTEIN sequence
Length: 343
VSETDPRKEEEPDDDARPLTGEPVSPAAMRLRAEPPRVTRLSRKVLAGLGLVASVGIGGALVYALQTRDGGRPNEELYSTENRPTADGIAGLPRDYSGVPQLGPPLPGDLGRPMLDAQNRGQPVPAPGVAAANPGLSAEEQRRLQELESARTARLFAATETHTANVAPAAPAGTAPSPIPDLTTLGLAPAPATPTAQDRQNAFLNAAADRRTVAPDRVAAPASPNILQAGAVIPAALITGIRSDLPGQITAQVTENIYDSPTGRILLVPQGTRVIGQYDNNVQFGQSRVLLVWNRLIFPNGRSIVLERQPGADAEGYAGLQDGVDYHWWDLAKAAGLSTLLSV