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SCNpilot_expt_1000_bf_scaffold_2587_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(1458..1835)

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide deacetylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8DE similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 125.0
  • Bit_score: 197
  • Evalue 8.90e-48
Polysaccharide deacetylase {ECO:0000313|EMBL:AJP71062.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 125.0
  • Bit_score: 212
  • Evalue 2.90e-52
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 125.0
  • Bit_score: 103
  • Evalue 5.50e-20

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGCCGGTCACGCTGATCGAGGACCGCGCCGGACATCTGCGCCATTTCCAGATCTGCGCACTCTCCGCCGGCGAGATGCGCGCGGCGCTCGACCATGCCGTGGTGCGCAGCCATGCGGCGGTGACGATCGTGAGCCATGGCTTCGAGCTTGCAAATCGCGCCGGGACGCGGCCTAACGCCGTGCATGTGCGTCGCTTCGAAGCGCTGTGCCGCATGCTGGCCAGCCGCCGGGGGGTTCTGGTGACCGAACATTTCGCCGACAGGCCGAGAATGGCGCTCGGGCAGGAGGATGTGCCGCTCGGCCCGAGCCTGTTGCGCACGCGCTGGCGCCAGGCCGAGCAGCTCTGGTCGAACCTGGTCGAGGAGCGTGCCGCGTGA
PROTEIN sequence
Length: 126
VPVTLIEDRAGHLRHFQICALSAGEMRAALDHAVVRSHAAVTIVSHGFELANRAGTRPNAVHVRRFEALCRMLASRRGVLVTEHFADRPRMALGQEDVPLGPSLLRTRWRQAEQLWSNLVEERAA*