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SCNpilot_expt_1000_bf_scaffold_4041_5

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 4753..5724

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 323.0
  • Bit_score: 505
  • Evalue 5.50e-140
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 318.0
  • Bit_score: 444
  • Evalue 2.60e-122
  • rbh
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E4ABA4 similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 323.0
  • Bit_score: 492
  • Evalue 4.50e-136
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGGGCGATTCGGCCGGAATCGGCCCCGAGATCACAGCCAAGGCATGGAAGGCGCGGGAGCTCCACTCGCTCGCGCCCTTCTTTGCCATCGGCTGTCCCGCCGCCGTCGAACGCGTGTGGGACGGTCCGGTCGCCCGCATCAACAATCCGGACGAAGCAGCGGGCGCCTTCGGGGACGCGCTTCCGGTGCTTGCGGTAAGCGACACCTGCGAAGTCACCCCGGGCAGCCCCGACGAGGCCAGCGCGAAGGCGGCGCTCCAGTCGCTCGAACTGGCGGTGGGCCTCGCCAATGCCGGCGCGGCCGGCGGCGTGGTGACCGGCCCGGTATCGAAGGTCCAGCTCTACAAGATCGGCTTCACGCATCCCGGCCAGACCGAATTCGTCGCCGAACGTTGCGGCATCGCGCCCGAGAACGCCGTGATGATGCTCGCCGGCCCCACGCTGCGAGTGGTGCCGATCACGGTGCACGAGCCGCTGGCCCGGGTGCCCGAACTGCTCACCATCGACCTGGTGCTCACCAAGGCGCGCGTCACCGCACGCGGGCTGCTGCGCAATTTCGGCATCGAGCGCCCCCGGCTCGCCTTTGCCGGCCTCAACCCCCATGCCGGCGAAAGCGGGGAGATCGGGCGCGAGGAGATCGACGTGCTCCAGCCCGCCATCGCCCGGCTGCGCGAGGAAGGCATCGACGCGATCGGACCCTTCGCCGCCGATGCGATGTTCCATGCGCGTGCCCGGGCCGGCTATGATGCCGCGCTCTGCCCGACGCACGACCAGGCGCTGATCCCGATCAAGACGCTGCACTTCGACGAAGGGGTGAACATCACCCTCGGCCTGCCCATCGTCCGCACCTCGCCCGACCATGGCACGGCCTTCGGCATCGCCGGCACCGACGCTGCCAATCCCGGGGCGATGATCGCCGCGATCAAGATGGCCGCCAGCGCCACGCAGCGCCGGGCCGAAGCCGCGGCGTGA
PROTEIN sequence
Length: 324
MGDSAGIGPEITAKAWKARELHSLAPFFAIGCPAAVERVWDGPVARINNPDEAAGAFGDALPVLAVSDTCEVTPGSPDEASAKAALQSLELAVGLANAGAAGGVVTGPVSKVQLYKIGFTHPGQTEFVAERCGIAPENAVMMLAGPTLRVVPITVHEPLARVPELLTIDLVLTKARVTARGLLRNFGIERPRLAFAGLNPHAGESGEIGREEIDVLQPAIARLREEGIDAIGPFAADAMFHARARAGYDAALCPTHDQALIPIKTLHFDEGVNITLGLPIVRTSPDHGTAFGIAGTDAANPGAMIAAIKMAASATQRRAEAAA*