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SCNpilot_expt_1000_bf_scaffold_4317_11

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(9660..11546)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFF5AC related cluster n=1 Tax=unknown RepID=UPI0003CFF5AC similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 552.0
  • Bit_score: 972
  • Evalue 2.20e-280
Conjugal transfer protein TraG {ECO:0000313|EMBL:AJP73418.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 569.0
  • Bit_score: 1032
  • Evalue 0.0
conjugal transfer coupling protein TraG similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 624.0
  • Bit_score: 970
  • Evalue 3.40e-280

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1887
ATGCAATCCTCGAAGATCCTCTGGGGGCAGGTCATCATCGTGTTGTTGATCGTGCTCGGCGCGGTCTGGGGTGCGACACAATGGACCGCCCAGGCGCTCGGCTATCAGAGCGAGCTTGGACCGCCCTGGTTCTGGGTTGCGGGCTACCCCGTCTATCCGCCGCCCGCCTTCTTCTGGTGGTGGTTCAGCTTCGACGCCTATGCGCCCGAAATCTTCGTGAAAGGTGCGTACGTCGCAGCCTCCGGCGGGATCGCCGCGGTCGTGGTCGCGGTCGGCATGTCGGTCTGGCGCGCACGCGAACGAAAACATGCCGAGACCTATGGCTCTGCACGCTGGGCCACGCGCCGCGAGGTCGAGGCTGGCGGGCTGCTCGGCGACGACGGGGTGGTGCTCGGCCGGCTCGATGACGCCTATCTTCGCCATGATGGCCCTGAGCATGTGCTGTGCTTCGCACCGACGCGGTCGGGCAAGGGTGTCGGTCTCGTCATCCCCTCGCTGCTGACCTGGGCTGGTTCGGCGATCGTCCACGACATCAAGGGCGAGAACTGGACGCTGACCGCGGGCTTCCGCGCGCGGATCGGACGAGTGCTGCTGTTCGACCCGACCAATGCGGCCTCTGCCGGCTACAATCCGCTGCTCGAGGTGCGCAAGGGCGAATGGGAAGTCCGTGACGTCCAGAATGTCGCCGACGTGCTGGTCGATCCCGAGGGCTCGCTCGAGCGGCGCAACCATTGGGAAAAGACCAGCCACGCGCTGCTGGTCGGCGCGATCCTCCACGTTCTCTATGCCGAGCCCGACAAGACGCTCGCCGGTGTCGCCGCTTTCCTCTCCGATCCGAGGCGGCCGATCGAAGCAACGCTCGCTGCGATGATGTCGACCCGTCATTTGGGCGAAGCCGGTGTCCATCCCGTGGTCGCCTCTGCCGCGCGCGAACTGCTCAACAAGTCCGAGAACGAGCGCTCGGGCGTGCTGTCGACCGCCATGTCGTTCCTGGGCCTCTATCGCGATCCGGTCATCGCCCAGGTCACCAGCCGTTCCGAATGGCGGATCGCCGACCTCGTCGAGGGCGAACGGCCGTCGACGCTTTACCTCGTCGTTCCCCCTTCCGACATCAGCCGGACCAAGCCGCTGATCCGGCTCCTGCTCAACCAGATCGGCCGGCGGCTGACCGAGGAGCTCAAGCCCAGCGCCGACCGCCACAAGGTACTGCTGATGCTCGACGAGTTCCCGGCGCTCGGCCGGCTCGACTTCTTCGAGTCCGCGCTGGCGTTCATGGCCGGCTATGGATTGAAGGCGTTCTTGATCGCCCAGTCGCTCAACCAGATCGAGAAGGCTTACGGCCCCAACAATGCGATCCTCGACAACTGCCATGTCCGGGTGCGCTTCGCGACCAATGACGAGCGCACCGCCAAGCGAATCTCGGATGCGCTCGGCACCGCGACCGAGATGCGGGCGATGAAGAATTATGCGGGCCATCGGCTTTCGCCCTGGCTCGGTCATCTCATGGTCTCGCGCACCGAAACTGCGCGCGCGTTGCTGACGCCGGGCGAGGTCATGCAGCTGCCGCCCGACGACGAGATCGTGATGGTGGCGGGCGTCCACCCGATCCGGGCGATGAAGGCGCGCTATTTCACCGACCGGCCCCGCCTGCGCCAGGACCGGCGCGGACACCCCGGGCAAACGACTGGTCGGCGCTCCCAATCCCGGATCGCGCGCAGCCCATCGACACAGCGGTGCAAGGCGATGATGATTCCGCGAATGGCGGCATCCGCCGTGAGCCCGAGCTGCCCGAAGAACAGGATATCGTGCCCCGTCCGGCACCGCCGCCCGGCGAGTTCGAGTTCGATGACAGTGCCACCGAGGATGCGACCGTCACGCGACGTCTGA
PROTEIN sequence
Length: 629
MQSSKILWGQVIIVLLIVLGAVWGATQWTAQALGYQSELGPPWFWVAGYPVYPPPAFFWWWFSFDAYAPEIFVKGAYVAASGGIAAVVVAVGMSVWRARERKHAETYGSARWATRREVEAGGLLGDDGVVLGRLDDAYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWAGSAIVHDIKGENWTLTAGFRARIGRVLLFDPTNAASAGYNPLLEVRKGEWEVRDVQNVADVLVDPEGSLERRNHWEKTSHALLVGAILHVLYAEPDKTLAGVAAFLSDPRRPIEATLAAMMSTRHLGEAGVHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPVIAQVTSRSEWRIADLVEGERPSTLYLVVPPSDISRTKPLIRLLLNQIGRRLTEELKPSADRHKVLLMLDEFPALGRLDFFESALAFMAGYGLKAFLIAQSLNQIEKAYGPNNAILDNCHVRVRFATNDERTAKRISDALGTATEMRAMKNYAGHRLSPWLGHLMVSRTETARALLTPGEVMQLPPDDEIVMVAGVHPIRAMKARYFTDRPRLRQDRRGHPGQTTGRRSQSRIARSPSTQRCKAMMIPRMAASAVSPSCPKNRISCPVRHRRPASSSSMTVPPRMRPSRDV*