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SCNpilot_expt_1000_bf_scaffold_4317_12

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(11559..11882)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237DEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 107.0
  • Bit_score: 149
  • Evalue 1.80e-33
Type VI secretion protein {ECO:0000313|EMBL:AJP74651.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 106.0
  • Bit_score: 186
  • Evalue 2.50e-44
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 107.0
  • Bit_score: 141
  • Evalue 1.60e-31

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGGCAAACGTGTCACGCTCGCCCCGAACCTGATCGACACACTGCGCTCGGCCGACTTGCGCGAGGCGTCCGCACGGATCGCCGCGCGGACCGGGCTCACACCCTATCAAAATACGCCCGGCTCGACGATCGCCGGCACCTATCGTGAGCGGGTCACGCTCGCCTCGGGCCGCTTTGCGATGATCGACGACGGGCTCGGCTTTCAGCTCGTTCCCTGGCGCCCGGCGCTCGATCGGCAGCTTGGGGCCACCATCACCGGCACGATGGCTCCCGGTGGCGGCATCGACTGGACCTTCGGCCGCAGCCGCGGCCTCGGCATCTAG
PROTEIN sequence
Length: 108
MGKRVTLAPNLIDTLRSADLREASARIAARTGLTPYQNTPGSTIAGTYRERVTLASGRFAMIDDGLGFQLVPWRPALDRQLGATITGTMAPGGGIDWTFGRSRGLGI*