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SCNpilot_expt_1000_bf_scaffold_4317_18

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(15634..15909)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IJ72_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 81.0
  • Bit_score: 127
  • Evalue 6.30e-27
Transcriptional regulator {ECO:0000313|EMBL:AJP73421.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 91.0
  • Bit_score: 152
  • Evalue 3.40e-34
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 84.0
  • Bit_score: 126
  • Evalue 4.40e-27

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGTCAGGTGAGACGACACAGCGGCTGCTCAGAACCCCCGATGCCGCGCTGCTGCTGGGTCTCTCGGCGCGCACGCTGGAGAAGCATCGCTGCTATGGCACCGGGCCAGTCTACCGGAAGCTCGGCGGCCGCATCGTCTATGCCGTGGACGACCTGGTCAGCTGGGCCGACCAGGGGGTTCGGCGCTCGACCTCCGACACCGGCACTGGCACCGTCCATCCTGCCAAGCGCATCGATCCGAGCATTCTCGATCGCAAGGGGCCGGTGCGGCGATGA
PROTEIN sequence
Length: 92
MSGETTQRLLRTPDAALLLGLSARTLEKHRCYGTGPVYRKLGGRIVYAVDDLVSWADQGVRRSTSDTGTGTVHPAKRIDPSILDRKGPVRR*