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SCNpilot_expt_1000_bf_scaffold_6693_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 312..998

Top 3 Functional Annotations

Value Algorithm Source
surface antigen msp4 family protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A6D similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 224.0
  • Bit_score: 191
  • Evalue 6.80e-46
DNA, contig: SP663 {ECO:0000313|EMBL:GAN15694.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 228.0
  • Bit_score: 178
  • Evalue 8.40e-42

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGGTACCCGCTTTCCGCCACTGCGCCCTCGCCGCGCTCGCAATCGCCGCAGCCGGCATTACCCCGGCAGCCGCGCAGGATGAACCGTCGACCGGCGTCTATGGCGTGGCGCGGGCCGGCCTGTCCATCGACTCCAATGCGCGCCTCCAGGGCAACAACCCCACCGCCGGAACCACGCTCCAGCGCGACACCGACTATAAGCGCGGCTTCAATGGCGAACTCGGCATCGGCTATGATGCCGGCCCGTTCCGTCTCGAAGGCACGGTCGGCTACACCACCGCCGGCGTCGACAAGAAGCAGGCGGCCAAGGGCGGCTTCACTGCGGACGGGCGGACCAAGGCGCTCACCATCGGCGCGGCGGGCTATTTCGACATCGCGGCGAGCGAGCATGTGGTGCCCTATGTCGGCGGCGGGATCGGCATGTCGCGCGTGGACTCGCGCATGAGCCGCCTGAGCGGTTCGCCTGCCACCGGCAGCCGCTATTCGGGCAAGGACTGGGGCTTCAACTGGCACCTCGACGCGGGCGTCGGCATCGCCGCCACGCAGTCGACCACGATCGAGCTGGGTGCGCGCTATTCCCGGACCTCGTCCCTGCGCTTCGACGGCTTCAATGGCGCGACCAAGGCGCAATTCCGTCCGCGCATGTCGGGCTGGTCCGCCATGCTCGGAATCCGCCAGGCCTTCTGA
PROTEIN sequence
Length: 229
MVPAFRHCALAALAIAAAGITPAAAQDEPSTGVYGVARAGLSIDSNARLQGNNPTAGTTLQRDTDYKRGFNGELGIGYDAGPFRLEGTVGYTTAGVDKKQAAKGGFTADGRTKALTIGAAGYFDIAASEHVVPYVGGGIGMSRVDSRMSRLSGSPATGSRYSGKDWGFNWHLDAGVGIAATQSTTIELGARYSRTSSLRFDGFNGATKAQFRPRMSGWSAMLGIRQAF*