ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8892_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 2..1885

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USH7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 636.0
  • Bit_score: 829
  • Evalue 2.30e-237
TonB-dependent receptor {ECO:0000313|EMBL:KGB52709.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 651.0
  • Bit_score: 923
  • Evalue 1.60e-265
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 636.0
  • Bit_score: 753
  • Evalue 5.10e-215

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1884
GTCCCCGCCGAAGGGCTGAAGCTGGTGTCGCAGACCGCCTATGCCCGCGACCGCTATTATTCTTCGCAGGACTATAACCGGTTCGTCAGCAACCCGATCTTCAACGACTCCTCGCAGCTCCTCCTCGACGTGCTCGGCCGGACCATGGACACGTCGGAACTGCCCACCCCGGGCGGCATATATTGCGATCCCCAGCTCGGCTGCTCCGACCGAATGGTCTCGGTCGACATAAGTCGTTCTAGAAATCGCCAATGGTCTCAGGAGTTCCGCCTTCAATCGAGCTTCAGCGGACCGCTCAATTTCAACCTTGGATTGAACTATCTCGATTTCAAATCCAAGGACGATTACTACGTCTTCAATAACATGTTCACCCTGATCGCCGACTGGTATTACAGCCGCGGCGGCACGACACTCAAGCCGGCGGTCGCGCCCTGCGGACTCGGCTTCGAAGCACGCGAATGCCCCTATGTCGACCGCAACCCCCTGGGAAGCCTCGACAATCAGGGCCACAACTACTTTCTGAGCCAGAATGGCGTGCGGATCAAAAGCAAGGCCGCCTTTGGCGAGCTCTACTGGAACGCCACCGACAATCTGAAGCTGACCGTGGGCCTGCGCTACACGCAGGACGAGAAGGTCTCGACCCAGATTCCCAGCCAGCTGCTGCTGGGCGGCGGCACCGGTACGCCGTTCCCCGGGGACACCACCGGCGGCCGGGTGAACAGCGGCTATCCCGCCCTGCCCGACATCCACCAGAAATGGGGGAAGTTCACCGGGCGCGCGGTGATCGACTGGAAGCCGACGCTCAGCTTCACCGACGACACGCTCCTCTATCTTTCGGCGGCCCGCGGCTACAAGGGCGGCGGCGTCAATCCGCCTCGCGTCGATTTCAACCCGGCGATCGTGCAGTATCAGTTCCTGCCGCAGACCTTTCGGCCGGAATATGTCAACGCCTTCGAGATCGGCACGAAGAACGCCTTTGCCGGCCGCAAGCTGACTCTGAACGCCACTGCATTCCTGTACGATTACAAGGATTACCAGATCTCGCAGATCGTCGACCGGATTGCCTATAACGAGAATTTCGGCGCCACGAGCATGGGATTGGAGCTGGAGGCGGCATGGCGCCCCTCGCGTGCCTTTCGCATCGACGGCAATTTCGGCCTCCTCAAGACGCGGCTGAAGAAGGGCTCGGAGTCGATCGACGTGATGAACCGGACGCAGGGCGATCCGGACTGGGTGGTGCTGCGGCCCTGGCTGCAGGTCCCCTCGAACTGCATCGCGCCCCGCGCGCTGGTGGAGAAGGTGCTGCCGTCGGGCAACGAGATCGCGCTGGCCGCGCTCTGCCCGGGCGCGACCCGCATCGGCACCTACAACCCGGCGGTGGACAGCAAGTTCAAGCTCTACAACACCTATGGCTTCACCTATGATCCGTTCGCGCCCTACAATGCGAGCACGGTCGGCCTGAACATCGCCCAGGGCGGAAGCGGCGCGCCCAATGGCGGGCGCGGCTTCGCCGCCGACCTCACCGGCAACGAGCTACCCAACGCCCCGCGCTGGACCGCCAATGTCGGCGCGCAATACACTTTCTTCCTGGATGGTGGAGACTGGGAACTCACGCTGCGCGGTGACTATTACCGTCAGTCAAAAAGCTATGCGCGCGTTTATAATACCGCCTATGATCGCCTGAGAGCGTGGGACAACGTAAATGCAGCCCTGACTTTGTCTCGGCCGAAATCCGACATTACATTTCAGCTCTACGTAAAGAACCTTTTCAACAACACCCCGATCACGGACTTCTTCACAAATGCCGATGATACTGGCCTGACAACCAACGTATTCACGTTGGACCCTCGCATCGTGGGATTCAACATCATGAAGCGATTCTGA
PROTEIN sequence
Length: 628
VPAEGLKLVSQTAYARDRYYSSQDYNRFVSNPIFNDSSQLLLDVLGRTMDTSELPTPGGIYCDPQLGCSDRMVSVDISRSRNRQWSQEFRLQSSFSGPLNFNLGLNYLDFKSKDDYYVFNNMFTLIADWYYSRGGTTLKPAVAPCGLGFEARECPYVDRNPLGSLDNQGHNYFLSQNGVRIKSKAAFGELYWNATDNLKLTVGLRYTQDEKVSTQIPSQLLLGGGTGTPFPGDTTGGRVNSGYPALPDIHQKWGKFTGRAVIDWKPTLSFTDDTLLYLSAARGYKGGGVNPPRVDFNPAIVQYQFLPQTFRPEYVNAFEIGTKNAFAGRKLTLNATAFLYDYKDYQISQIVDRIAYNENFGATSMGLELEAAWRPSRAFRIDGNFGLLKTRLKKGSESIDVMNRTQGDPDWVVLRPWLQVPSNCIAPRALVEKVLPSGNEIALAALCPGATRIGTYNPAVDSKFKLYNTYGFTYDPFAPYNASTVGLNIAQGGSGAPNGGRGFAADLTGNELPNAPRWTANVGAQYTFFLDGGDWELTLRGDYYRQSKSYARVYNTAYDRLRAWDNVNAALTLSRPKSDITFQLYVKNLFNNTPITDFFTNADDTGLTTNVFTLDPRIVGFNIMKRF*