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SCNpilot_expt_1000_bf_scaffold_17726_5

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(2309..2698)

Top 3 Functional Annotations

Value Algorithm Source
transposase IS4 n=1 Tax=Sphingomonadaceae RepID=UPI0003B5A84A similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 129.0
  • Bit_score: 261
  • Evalue 5.20e-67
Putative transposase {ECO:0000313|EMBL:BAE93946.1}; TaxID=223555 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. A4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 129.0
  • Bit_score: 259
  • Evalue 2.10e-66
IS4 family transposase similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 129.0
  • Bit_score: 236
  • Evalue 5.60e-60

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Taxonomy

Sphingomonas sp. A4 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGAACACCAAGCTCCATGCCCTTGCCGACGCGAACGGCCGCCCGTTGAGCTTCTTCATGACCGCCGGACAGGTCAGCGACTACACCGGCGCGGCGGCCCTGCTCGACGAAATGCCCAAGGCGCAGTGGCTGCTCGGGGATCGCGGCTACGACGCCGACTGGTTCCGCGACGCTCTCCACGCCAAGGGCATCCAACCCTGCATCCCAGGCCGGCGATCGCGCAACGAGGCGGTCAGATACGACAAGCGGCGCTATCGGCGACGTAGCCGCATCGAGATCATGTTCGGCCGCCTCAAGGACTGGCGCCGCGTCGCTACCCGCTACGATCGCTGCCCAACCGCCTTCTTTTCCGCCATCACCCTCGCCGCCACCGTCATCTTCTGGCTGTGA
PROTEIN sequence
Length: 130
MNTKLHALADANGRPLSFFMTAGQVSDYTGAAALLDEMPKAQWLLGDRGYDADWFRDALHAKGIQPCIPGRRSRNEAVRYDKRRYRRRSRIEIMFGRLKDWRRVATRYDRCPTAFFSAITLAATVIFWL*