ggKbase home page

SCNpilot_expt_1000_bf_scaffold_26761_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(1109..1639)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000365B67A similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 176.0
  • Bit_score: 331
  • Evalue 5.60e-88
Conjugal transfer protein TraB {ECO:0000313|EMBL:AJA07207.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 176.0
  • Bit_score: 331
  • Evalue 1.00e-87
conjugal transfer protein TraB; K12065 conjugal transfer pilus assembly protein TraB similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 176.0
  • Bit_score: 304
  • Evalue 2.30e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GCGCCCGCCGTGCTTCCGAACGAGGTGAAGGCCAATCTCGCCGGCTGCTTCGTCATCGGCAATGCGACCGGCAGCCTCGCCAAGGAGCGGGTCGAGATCCAGCTGGTTTCGATCTCCTGCGTGGACTTTGAGAGTCATGCAGTCGTCGATCAGGCGATCAAGGGTTTCTTCGTCGATGCCGACGGCAAGAAGGGCCTGTCCGGCAAGGTCGTGACCCGTGCCGGCGCGACGCTCGCCCGCTCGTTCATCGCCGGCACGATCGCCGGCATCTCACAGAGCGTCGAAGGATCGTTCGGCAGCCTGTCGACGTCAGCGCTGGGCAGCGTGCGGAGCCTCGATGCCGGCGACGCCGTGAAGACCGGCATTGCCGGAGGGCTGTCCAAATCGTCGGACAAGCTCACCGACTTCTATCTCGATCTGGCCCGCCAGGCCGGCCCCGTCGTCGAAGTCGGCGCGGCGAAGGACGTCGTGGTCGTCATCCAGGAGGGCCTCGCCCTCGAGATCAAGCCATCGGTCGGGAGCAAATTCTGA
PROTEIN sequence
Length: 177
APAVLPNEVKANLAGCFVIGNATGSLAKERVEIQLVSISCVDFESHAVVDQAIKGFFVDADGKKGLSGKVVTRAGATLARSFIAGTIAGISQSVEGSFGSLSTSALGSVRSLDAGDAVKTGIAGGLSKSSDKLTDFYLDLARQAGPVVEVGAAKDVVVVIQEGLALEIKPSVGSKF*