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SCNpilot_expt_1000_bf_scaffold_10933_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: 3997..4314

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1499686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 20_BN.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 101.0
  • Bit_score: 109
  • Evalue 2.20e-21
trpA; tryptophan synthase subunit alpha; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 105.0
  • Bit_score: 106
  • Evalue 4.20e-21
tryptophan synthase subunit alpha n=1 Tax=Pseudomonas thermotolerans RepID=UPI00036059AF similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 101.0
  • Bit_score: 114
  • Evalue 8.30e-23

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Taxonomy

Pseudomonas sp. 20_BN → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
GTGCTGGATGGCGCAGGCGGCTTTCTCTATTACGTCTCGATCACCGGCATCACCGGCACCAAGAGTTTTCAGGAAGAAAGCGTTCGCGATGCCGTGTTGCGGCTGAAGGCGCGTGCGGGTCTTCCCGTGGTTGTCGGCTTCGGCATCAGAACGCCGGAACAGGCGGCGGCCATCACCCGTTTTGCCGATGGTGCCGCGGTCGGCACCGCGATTGTGGAGCGTGTTGCGGCGGTTTCCAGCCCCGGCGGCATCGACGGCGTGGTGGAATTCTGCCGCCAACTGGCAGATGCGGTACACACACCCAATGTGGTAGGGTGA
PROTEIN sequence
Length: 106
VLDGAGGFLYYVSITGITGTKSFQEESVRDAVLRLKARAGLPVVVGFGIRTPEQAAAITRFADGAAVGTAIVERVAAVSSPGGIDGVVEFCRQLADAVHTPNVVG*