ggKbase home page

SCNpilot_expt_1000_bf_scaffold_15194_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: comp(1546..1890)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V8C5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 79.0
  • Bit_score: 66
  • Evalue 2.20e-08
Uncharacterized protein {ECO:0000313|EMBL:ENN87272.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.2
  • Coverage: 79.0
  • Bit_score: 66
  • Evalue 3.00e-08
type IV pilus assembly PilZ similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 78.0
  • Bit_score: 62
  • Evalue 1.30e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGAGTGGCACCAATGAAGGCGCGCCGCCGGAAAAGCGCCAATCAGCCCGCCGCCGGACCCTTTTGCGTGGCAAACTTGTCCACTCTGCCGGTTCCTTTACGCAGGATTGCGCCATCCGCAATCTTTCGGAAACAGGCGCCCAGGTTCGCGTGACGAATGCCCAATCGATCCCGGACAAGATGCAACTGATCGATATCACCAACGCCATGCTTTACGAGGCGGAAATCGTCTGGCGCCGCGCGCCCGAATTCGGCCTGCGCTTTCTGGCCGGTTGCCCCGCACAGGAAGCGCCGCCCCGCCTCTATTATCTACGCCAGCTCTGGCTGGAATGTTCGCGGCGCTAA
PROTEIN sequence
Length: 115
MSGTNEGAPPEKRQSARRRTLLRGKLVHSAGSFTQDCAIRNLSETGAQVRVTNAQSIPDKMQLIDITNAMLYEAEIVWRRAPEFGLRFLAGCPAQEAPPRLYYLRQLWLECSRR*