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SCNpilot_expt_1000_bf_scaffold_18184_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: 2357..2689

Top 3 Functional Annotations

Value Algorithm Source
Macrolide-specific efflux protein MacA n=1 Tax=uncultured bacterium BLR8 RepID=C0IN90_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 117.0
  • Bit_score: 69
  • Evalue 2.50e-09
Macrolide-specific efflux protein MacA {ECO:0000313|EMBL:GAF58225.1}; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. JCM 18902.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 111.0
  • Bit_score: 69
  • Evalue 2.70e-09
RND family efflux transporter MFP subunit; K13888 macrolide-specific efflux protein MacA similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 125.0
  • Bit_score: 64
  • Evalue 3.30e-08

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Taxonomy

Psychrobacter sp. JCM 18902 → Psychrobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
GTGCTGGTTCCCATTTCGGCCCTGCATCAGCGCCGCGCCCGTCGCGGCGGCACCGAAACGGCCGGACAGGCGCAGACGAAACGCCGTGGCGGCCTTGCGCCATGGGAAGCGGGAGAGAAGAACGCCATCGTTCTGGTCAAGGGCGCGGATGGGAAGATCGAATGCCGCGCCGTTTCGGTCGGCGTCAGCAATCGCGTTTCGGCGCAGATCCTGTCGGGCCTGGACGCGGGCGAACAGGTGGTGACCGGACGCGAGACCACGCAAGGCAGCAGCAGCAATAACAGCGGGAATCGTGGTGGCCGGATGGGCGGCCCGCGTTTCGGGCGCCTGTAA
PROTEIN sequence
Length: 111
VLVPISALHQRRARRGGTETAGQAQTKRRGGLAPWEAGEKNAIVLVKGADGKIECRAVSVGVSNRVSAQILSGLDAGEQVVTGRETTQGSSSNNSGNRGGRMGGPRFGRL*