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SCNpilot_expt_1000_bf_scaffold_19543_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: 1..369

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFP9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 116.0
  • Bit_score: 200
  • Evalue 7.90e-49
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 116.0
  • Bit_score: 200
  • Evalue 1.10e-48
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 122.0
  • Bit_score: 197
  • Evalue 2.10e-48

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
TGCATCGCGACGCCGGACATGATGGGCGTGGTTGGTCGTTTGGGTAAGGTGCTTGGCCCTCGCGGCCTGATGCCGAACCCGAAGGTCGGCACCGTAACCATGGATGTCGCCGGTGCGGTGAAGGATGCGAAGGGCGGCGCGGTGGAATTCCGGGTCGAGAAGGCGGGCATCGTTCAGGCCGGCATCGGCAAGGCAAGCTTCAGCGAAGATGCCATCGTGCAGAACGTGAAATCGTTTGTGGACAGCGTCATCAAAGCCAAGCCGGCGGGCGCCAAGGGCACCTATCTGAAGAAAGTTTCGCTCAGCTCGACAATGGGCCCGGGTGTCCGCGTGGCGCTCGGCAGTGTCGGCGCTGGATCGGAGGCGTAA
PROTEIN sequence
Length: 123
CIATPDMMGVVGRLGKVLGPRGLMPNPKVGTVTMDVAGAVKDAKGGAVEFRVEKAGIVQAGIGKASFSEDAIVQNVKSFVDSVIKAKPAGAKGTYLKKVSLSSTMGPGVRVALGSVGAGSEA*