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SCNpilot_expt_1000_bf_scaffold_19543_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: 1770..2138

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 123.0
  • Bit_score: 201
  • Evalue 8.50e-49
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 120.0
  • Bit_score: 197
  • Evalue 2.10e-48
DNA-directed RNA polymerase subunit beta n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CU65_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 120.0
  • Bit_score: 197
  • Evalue 6.70e-48

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Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGGCACTCTCGTTCACGGGACGCAAAAGGCTTCGGAAATATTTCGGCAAAATGGTCGAAGTGGCCCAGATGCCGAACCTCATCGAGGTTCAGAAGACCTCGTATGACCAGTTTCTCCAGGTGGATAAGCCTGAGGCGGGCCGTTTGGACGAGGGGCTTCAGGCCGTCTTTTCCTCGGTGTTCCCGATCAAGGATTTCTCCGAATCCTCGCTTCTCGAATATGTGGATTACCACTTCGAGGAGCCGAAATACGATGTGGAGGAGTGTCAGCAGCGCTCGATGACCTTTGCCGCGCCGCTGAAGGTCACGCTGCGCCTGATCGTGTTCGATGTTGACCAGGAAACCGGCGCGAAGTCGGTGAAGGACATC
PROTEIN sequence
Length: 123
MALSFTGRKRLRKYFGKMVEVAQMPNLIEVQKTSYDQFLQVDKPEAGRLDEGLQAVFSSVFPIKDFSESSLLEYVDYHFEEPKYDVEECQQRSMTFAAPLKVTLRLIVFDVDQETGAKSVKDI