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SCNpilot_expt_1000_bf_scaffold_33737_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: 562..828

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JM09_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 88.0
  • Bit_score: 116
  • Evalue 1.80e-23
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 88.0
  • Bit_score: 118
  • Evalue 6.80e-24
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 88.0
  • Bit_score: 115
  • Evalue 9.90e-24

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Taxonomy

Thalassobacter sp. 16PALIMAR09 → Thalassobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGCCCAATATTGCTTCGGCCAAAAAGCGGGTCCGCACCGCGGCCAAACGCACCACGGTCAACCAGGCCCGCAAGAGCCGTATCCGCACCTTCACCCGCCAGGTGGAAGAAGCGATTGCCAAGGGCGATCAGGCGGCGGCCAAGGCGGCGCTGAAGGCGGCAGAGCCCGAAATCATGCGCGGCGTCTCCAAGGGAGTTATCCACAAGAATACCGGCGCCCGGAAGGTCTCCCGGCTGTCGAAGCGTGTGGCCAAGCTCGGGGCTTGA
PROTEIN sequence
Length: 89
MPNIASAKKRVRTAAKRTTVNQARKSRIRTFTRQVEEAIAKGDQAAAKAALKAAEPEIMRGVSKGVIHKNTGARKVSRLSKRVAKLGA*