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SCNpilot_expt_1000_bf_scaffold_2913_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(7134..8744)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane EAL domain-containing protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CQX7_RHILU similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 529.0
  • Bit_score: 721
  • Evalue 7.60e-205
  • rbh
Signal peptide protein {ECO:0000313|EMBL:KJF67095.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 529.0
  • Bit_score: 740
  • Evalue 2.20e-210
putative signal transduction protein containing sensor and EAL domains similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 529.0
  • Bit_score: 717
  • Evalue 4.50e-204
  • rbh

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1611
ATGGACGCGCGGCGCTTCCGCATCATCGCGGCAGCCATTCTTCTTGGATTGCTCGGGGCGATCATTCCGATCGCCGCCATGGCCTATATGTCGTGGAGCATTGCCGTCGGGAAGGAGCAGGACGCGCTGAACCTGCTCGCCAACCAGGCGATCGAACGCGCCGCCAACACCTTCAAGGACGCTGGACGGGCGCTTGATGAGATCAAGGCGGCGGCTCTGACGCCATGCTCCGACGCCCATATCCGGCGCATGCGCATGATCGCCATCAACACGTCCTCGGTGGAGGAAATCGGCTATTTCGCCGACGGTTTCCTGAAGGGCACGTCATGGGGGATGACCGAGGGCGCCATTCCGCGCACATCGGTCGATTATACGACGCGGGATGGGCTGGGGGCCAGCATGCGGATCGAGCCACGCGTCAGCCGTGGCAAGCCGATGACCGCGATCTATGCCGGCGACTACAACGTTCTGGTCTCGCCCTCGCGCTTTGTCGACATCCTGCTTGAAAAGGACGTGTCGCTGGCGCTTGCCAACGAACGGGGCGCGTTGATCAGTGTTTTGAACGCGCCGGATGCCGGGCTGGTCAAAGGCCTGTTAGGCGAGCCGAAAAAGGGCATGACCGATCAAGCCATTTACGCGGTCGCCCATCATGACGGCCTCATGGCGATCGCGATGGAGCCGCGCACCCGTCTCGCTGATCGGCTGCATGACGAACGGTTGTTTCTGCTGCCGGTCGGCGCGTTCATAGCAGCCTTCATCGTCGGCACCGTGGCCTGGTTCTCGCGCAAACGCCTGTCGCCATTAGCTGAACTTGAGATCGCAGTGCGCAAGCGCGAATTCATCGTCCACTATCAACCGATCGTCGAATTAAAGAGCGGCATCTGTATCGGGGCCGAAGCCTTGGTGCGGTGGAAACGGCCCGATGGCTCGCTGGTGCGGCCCGATCTGTTCATCCCCTTGGCGGAGGAGAGTGGTCTCATCCTGCCGATCACCGATCAAGTGGTCGATGCCGTCATCGCCGATCTCAGGTCTGTCCTGGTCGGCGACAGAACTCTGCATATCGCCATCAATCTTGCCGCCGCCGATATCACTTCCGGCCGTATCCTCGATGTTCTGACAGAAAAATTGCCGCCGACGGGCATCCGCGCCGCGCAAATCTGGCTGGAAGCGACGGAGCGCGGTTTCATCGACGTCGAAGCGGCGAAAACCACGCTCGCCAAGGCCCGGGCGCTCGGCCATTCGGTCGCGATCGACGATTTCGGCACCGGCTATTCCAGCCTGCAATATCTGCAAGGCCTGCCGCTCGACGCGCTGAAGATCGACAAATCCTTCATCGACACGGTCGGCCGCAATACTGCCACCAGTTCGGTCACGTCCTATATCATCGACATGGCCCGCACCCTTGGCCTGTTCAGTGTCGCCGAAGGCATCGAGACGGAAGAACAGGCCACTTATCTCAGAGCCCATGGCGTTGACTTCGGGCAGGGTTGGTTGTTCTCCAAGCCGCTGCCCGCGCCGGACTTCATCGCCTACCACCGAAACACAAAACAGAAATACGGCGCGGCGCCGGAAGTCATTCAGGTGGGCATCGCGGGGCTGCCTGCCGCCTAG
PROTEIN sequence
Length: 537
MDARRFRIIAAAILLGLLGAIIPIAAMAYMSWSIAVGKEQDALNLLANQAIERAANTFKDAGRALDEIKAAALTPCSDAHIRRMRMIAINTSSVEEIGYFADGFLKGTSWGMTEGAIPRTSVDYTTRDGLGASMRIEPRVSRGKPMTAIYAGDYNVLVSPSRFVDILLEKDVSLALANERGALISVLNAPDAGLVKGLLGEPKKGMTDQAIYAVAHHDGLMAIAMEPRTRLADRLHDERLFLLPVGAFIAAFIVGTVAWFSRKRLSPLAELEIAVRKREFIVHYQPIVELKSGICIGAEALVRWKRPDGSLVRPDLFIPLAEESGLILPITDQVVDAVIADLRSVLVGDRTLHIAINLAAADITSGRILDVLTEKLPPTGIRAAQIWLEATERGFIDVEAAKTTLAKARALGHSVAIDDFGTGYSSLQYLQGLPLDALKIDKSFIDTVGRNTATSSVTSYIIDMARTLGLFSVAEGIETEEQATYLRAHGVDFGQGWLFSKPLPAPDFIAYHRNTKQKYGAAPEVIQVGIAGLPAA*