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SCNpilot_expt_1000_bf_scaffold_4716_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(3438..4421)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JW31_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 319.0
  • Bit_score: 195
  • Evalue 8.80e-47
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 319.0
  • Bit_score: 195
  • Evalue 2.80e-47
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADJ24910.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.7
  • Coverage: 319.0
  • Bit_score: 195
  • Evalue 1.20e-46

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGATCGAGCCGGTAATCCGTGACTTTGACTTCCTCAAAAGCCTGGAGGTTTTTGTCAGCGTAGCCGATGCCGGCGGCATGACCGCTGCGGCCGGCCAATTGGGCATCAGCCAGTCGGCCATTTCGCAACAGATCAAACTGCTAGAAGCCCATTTTCGCGCACCGCTGTTTCACCGCGACATCCGCCCTCTGCGATTGACACCCGCCGGCCAGCTTCTGAAAAACCGGGCAACATCCGTTCTACTGGCGGCGCGCGAAATGCGCGATGAAGTTCGGCACGTGGCGGCCGGCCGGCTGCCGCACTTGCGTATCGCTATCTTGTCGACATTCGCACGCTATCTTGTACCGACCATCCTCGATGCAACCATGAATCGATCCTTGATCGCGCAGCATGTCACCGTAATCCGAGGCCTGACCATCAACCACGCGCAGGACCTTAACAACCGCGACATCGACGTGGCGTTTACGTCCGATGCCCTGGAGGATATCGACGCCTTCGACCATCTTGATCTGATACAGGAATCCTATGTCGTCGCGACGCCCAAAAGCGTGACGACCAGGGTCCGCGACTTGAAGACCCTCAGCAAAGCCCAGCCATTTCTGGGCTATTCCGGGCGAACCCAATCCGGTCAGCGCATCGAACGACATCTGCGCCGCCTTCGCCTGGACATCCAGCGAGGCAATGCCTTCGAATCGTCCAGCGATCTGGTGGCAGCCATTTCACATGGTTACGGCTGGTCCATTCTGACACCCTCGCAACTCTTCGATCCTCTCGAAGCCGGCGCCGAGATTGCCATCCATGAAATGCCCGCGCCTGGGCTGAGCCGGACCCTGGGGCTTGTCTGGCGCAAGCGCGAAATGCCTGACGCCATGAAGGAACTGACAGATGTCTGCCGCACGGTCCTTCAAGACGAATGCCTGCCGCGTCTACGCAAGCTCGCGCCAGACCTCGTACCAAATTTCCGCATTCTCGACGCGCCTTGA
PROTEIN sequence
Length: 328
MIEPVIRDFDFLKSLEVFVSVADAGGMTAAAGQLGISQSAISQQIKLLEAHFRAPLFHRDIRPLRLTPAGQLLKNRATSVLLAAREMRDEVRHVAAGRLPHLRIAILSTFARYLVPTILDATMNRSLIAQHVTVIRGLTINHAQDLNNRDIDVAFTSDALEDIDAFDHLDLIQESYVVATPKSVTTRVRDLKTLSKAQPFLGYSGRTQSGQRIERHLRRLRLDIQRGNAFESSSDLVAAISHGYGWSILTPSQLFDPLEAGAEIAIHEMPAPGLSRTLGLVWRKREMPDAMKELTDVCRTVLQDECLPRLRKLAPDLVPNFRILDAP*