ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4755_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 5818..6375

Top 3 Functional Annotations

Value Algorithm Source
WcbD protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IG49_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 156.0
  • Bit_score: 134
  • Evalue 1.00e-28
wcbD; WcbD protein; K10107 capsular polysaccharide transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 156.0
  • Bit_score: 134
  • Evalue 3.30e-29
WcbD protein {ECO:0000313|EMBL:BAF86037.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 156.0
  • Bit_score: 134
  • Evalue 1.50e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azorhizobium caulinodans → Azorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAATTTGCCCGATGTTGTTGCCGGCTTTTCGCGGCCAAAGGCGGTGCTTGCGCCCGGTTCGGTCAATCACATCTTAGATAAAGCCGAGCGCCGGGCTCGCTTGATCAAGAAACTCATTTTGGCGGTGATGATCGTTCCGCCGATCTTGGCGGTCTTCTACTACGGGTTGTTTGCGGCGGACCGGTATGTCTCGGAAACCAATATCATCGTTCGAAGCGTCTCCAGCAAGCGCGCGGCCGGCGGGTTGGACATGGTGCTTCAGACGTTTGGTATTTCGCGAGCCGTCGACGACACCAATGCCGTTCAGAACTTCATGCTGTCGCGTGATGCCGTGCGTGCGCTGGAGAGCCGGCTTCCACTGCGAGAAATCTTCTCCAACTCCAATGCCGATATTTTCACGCGGTTTCCACGTTTCTGGCTGTGGAAGAACGATGCCTTTGAGCGGCTTTACGAATACTATCTCGATCGCGTGACGGTCATTCAGGATCCGTCGAAAGGTATTACGACGATAAGAGCGGTTGCCTTCCAGCCTGAAGATGGACTGCGCATTACACAA
PROTEIN sequence
Length: 186
MNLPDVVAGFSRPKAVLAPGSVNHILDKAERRARLIKKLILAVMIVPPILAVFYYGLFAADRYVSETNIIVRSVSSKRAAGGLDMVLQTFGISRAVDDTNAVQNFMLSRDAVRALESRLPLREIFSNSNADIFTRFPRFWLWKNDAFERLYEYYLDRVTVIQDPSKGITTIRAVAFQPEDGLRITQ