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SCNpilot_expt_1000_bf_scaffold_6325_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(296..1291)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 324.0
  • Bit_score: 456
  • Evalue 2.30e-125
yjbN family TIM-barrel protein; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 327.0
  • Bit_score: 449
  • Evalue 1.10e-123
  • rbh
tRNA-dihydrouridine synthase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QKF3_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 318.0
  • Bit_score: 449
  • Evalue 2.60e-123
  • rbh

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
GTGATTGATAATAGGTGGAAATTTTCCGTCGCGCCGATGATGGACTGGTCGGACCGGCATTGCCGGTTCCTGCACCGTCTGCTGTCGCGCCGCGCGCTTCTCTATACGGAAATGGTGACCACCGGCGCGATCCTGTTCGGGCCGCGCGAGCGTTTGCTTGCCTATGATCAGGCCGAACATCCGGTCGCCTTGCAACTCGGCGGCAGCGAGCCTGAGGCTTTGGCGCAATGCGCGCGCATCGGCGAAGAGTTTGGCTATGACGAGATCAATCTTAATTGCGGCTGCCCGTCCGATCGCGTGCAGAACGGTGCCTTTGGCGCTTGCCTGATGCGCGAGCCCGATCTCGTTGCAGCTTCCGTGGCGGCGATGAAAGCGACGGTGAAGATTCCCGTCACCGTCAAATGCCGCATCGGCGTCGATGATCAGGAGCCGCGCGAGGCTTTGTGGACGATGGCCGAGAAGCTGCGGGCTGCTGGCGTCGATGCACTGATCGTTCATGCGCGCAAGGCTTGGCTGAAAGGCCTTTCGCCGAAGGAAAATCGCGACGTCCCGCCGCTCGACTATCCCCTCGTGCACGCCTTGAAGCGCGACTTCCCAGAGATGCCGATCGCCATCAATGGCGGCCTGCGCAGCATGGATGTCATCAAGGCGCAGCTCGAAGACGTCGATGGCGCGATGGTCGGCCGCGAAGCCTATCAGAACCCCGGGCTCTTGCTCGAAGTCGACCCAGAACTCTTCGGCGAAGCCGCGCCCATCGCCGATGCGTTCGAAGCGGTGGCTTTGATGGAGCCCTATATCGCCGGCGAACTGGCCAAGGGCGCTCGTCTCTCCGATATCACCCGTCACATGCTCGGTCTCTTCGCCGGCATGCCGGGGGCACGCGCCTTCCGTCGTCATCTGGCGACCGAAGCGGTCAAGCGTGGCGCTGGCCTCGATGTGCTGCGAGCGGCCGTCGCGCATGTGAGCCGCGCGGATCCGGCGCAAGACGCCGCCTGA
PROTEIN sequence
Length: 332
VIDNRWKFSVAPMMDWSDRHCRFLHRLLSRRALLYTEMVTTGAILFGPRERLLAYDQAEHPVALQLGGSEPEALAQCARIGEEFGYDEINLNCGCPSDRVQNGAFGACLMREPDLVAASVAAMKATVKIPVTVKCRIGVDDQEPREALWTMAEKLRAAGVDALIVHARKAWLKGLSPKENRDVPPLDYPLVHALKRDFPEMPIAINGGLRSMDVIKAQLEDVDGAMVGREAYQNPGLLLEVDPELFGEAAPIADAFEAVALMEPYIAGELAKGARLSDITRHMLGLFAGMPGARAFRRHLATEAVKRGAGLDVLRAAVAHVSRADPAQDAA*