ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5952_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(1878..2240)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=RL18_BEII9 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 120.0
  • Bit_score: 187
  • Evalue 6.80e-45
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 120.0
  • Bit_score: 187
  • Evalue 2.10e-45
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 120.0
  • Bit_score: 187
  • Evalue 9.50e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGGCGAACAATGCTACGGCCACCGCCCGCCGCAAGGCGCGCGTCCGCCGCTCAATCCGTGCCCGGGCTTATGGCAAGCCGCGCTTGTCCGTGCACCGCACGTCCAAGCAGATCTATGCGCAGATCATCGACGACGAGAAGGGCGCGACGCTTGTCGCCGCTTCCTCGCTCGAAAAGGATCAGCGCTCGGCTCTGAAGACCGGTGCCAATGTGGATGCCGCCAAGGCGATCGGCAAGCTGATTGCCGAACGCGCCGCCAAGGCCGGCATCAAGGACGTCGTGTTCGATCGCGGCTCCTATATGTATCACGGCCGCGTCAAGGCGCTGGCCGAAGGCGCCCGCGAAGGCGGCCTCAACTTCTAA
PROTEIN sequence
Length: 121
MANNATATARRKARVRRSIRARAYGKPRLSVHRTSKQIYAQIIDDEKGATLVAASSLEKDQRSALKTGANVDAAKAIGKLIAERAAKAGIKDVVFDRGSYMYHGRVKALAEGAREGGLNF*