ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9735_13

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(9924..10706)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125N6_POLSJ similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 253.0
  • Bit_score: 173
  • Evalue 2.20e-40
iclR; IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 247.0
  • Bit_score: 173
  • Evalue 6.90e-41
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AET92892.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 247.0
  • Bit_score: 173
  • Evalue 3.10e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia sp. YI23 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
GTGACTGTTGACGACGATTTCGATGCCGGACACATCAAGTCCGTTTCCATGACCATTCGCCTGCTGCGTGAACTCGCCGCTTCGCGCGAGCCGGTGGGAGTGAGCGAATTGGCGCGGCGCGTCGGCGAATCGAAAGCGCGCATTCACCGCCATCTGGTCACGCTTCGAGACGAGGGGTTGCTGGCGCAAGAGGCCGTCGGCGATCGCTATCGGCTGGGCTGGGTGCTGTTCGAATTGGGGCAGGCCGCCGCCGCGCAATTTGACGTCGCGGAGGTCGCGGCGCCGGCGTTGCGCGCCTTGCGCTCGACGACTGGCTTGACAGTCGTGCTTAGCCAACGGGCTGGCGACGAGATCATCATCACGCATACGTTCGACAGTGAGAATATGATTGCGGTCACGGTGCGCAGCGGCCTGCGCGTGCCGGCGCATGGGTCGGCCGCGGGTCGCGTCATACTCGCCTTCATGCCGGATGAAGATCGCAAGCGAATCCTTGCCAAGCCATTGGTGAAACTGTCGCCGCATATGATGACGAGCAAAACAGAGATCGCCGGACGGGTCGCTGAAATTCGCGAGCGGCATTATGATTATGCGGTCAACGAATCTCAGTTCGGCGTCTGCTCCATAGCAGCGGGAATTTTTGACGGTGCCGGCAATATAGCCGCCGCGATCTCCGTGGTCGGCACTGAGTTGCAGATGCCCATGCCGCCGCGTGGCAAATTGCTGGAAGAACTGCTGGCCTGCGCGCGCGAGATTTCGCAGGCCTTGACGTCGCACCGGGCGTAG
PROTEIN sequence
Length: 261
VTVDDDFDAGHIKSVSMTIRLLRELAASREPVGVSELARRVGESKARIHRHLVTLRDEGLLAQEAVGDRYRLGWVLFELGQAAAAQFDVAEVAAPALRALRSTTGLTVVLSQRAGDEIIITHTFDSENMIAVTVRSGLRVPAHGSAAGRVILAFMPDEDRKRILAKPLVKLSPHMMTSKTEIAGRVAEIRERHYDYAVNESQFGVCSIAAGIFDGAGNIAAAISVVGTELQMPMPPRGKLLEELLACAREISQALTSHRA*