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SCNpilot_expt_1000_bf_scaffold_12218_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 2733..3479

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DI82_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 207.0
  • Bit_score: 203
  • Evalue 2.50e-49
Putative transport protein {ECO:0000313|EMBL:KIH82582.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 194.0
  • Bit_score: 212
  • Evalue 9.70e-52
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 139.0
  • Bit_score: 196
  • Evalue 7.20e-48

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Taxonomy

Pseudomonas batumici → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGGCATCCCCCTCCCCGCGCCGGGCCCTCGCCGCCCTGTCGCTTTCCATGCTGCTGTCGTCGCTGGGTATCAGTATCGCCAATGTCGGCCTGCCGACCCTGGCGCAGGTTTTCGATGCACCGTTTCAGGCGGTGCAGTGGATCGTGCTGGCCTATCTCCTGACCATCACCAGTTTGATCGTCAGCGCGGGCCGGCTGGGGGATCTGATCGGCCGGCGCCGCCTGCTGCTGGGCGGCCTCGCCCTGTTCACGATGGCCTCACTCCTCTCCGGCATCGCGCCGACGCTTGGCTGGCTGATCGGCGCGGGGGCGCTGCAGGGGCTTGGTGCGTGCGGGATGATGGCGCTCACCATGGCCTTCGTCGGCGAGACCGTGCCGAAGGAACGCACCGGCAGCGCCATGGGTTTGCTCGGCACCATTGCTCGGCACCATGTCGGCAGTCGGCACAGCGCTTGGTCCTTCTCTTGGCGGCGTTTTGATCGCAGCCTTTGGCTGGCCCGCCATCTTCCTCATCAATGCGCCGCTGGGCGTGCTGGCCTTCGCCCTCGCCTATTGTTACCTGCCGACGGATCGCGCCCCTGCGAAAGCCACTCGGCCTGGTTTCGATCTAGCGGGCACGGCGCTTTTGGCCACCGCTCTTGCCGCCTATGCGCTGGCGATGACCATCGGCCGCGGCCAGTTCGGCTTCACCAATCTGGCGCTGCTCTTGGCCTTCGCGATCGGCACGGCGCTGTTCGTTCGCGTTGA
PROTEIN sequence
Length: 249
MASPSPRRALAALSLSMLLSSLGISIANVGLPTLAQVFDAPFQAVQWIVLAYLLTITSLIVSAGRLGDLIGRRRLLLGGLALFTMASLLSGIAPTLGWLIGAGALQGLGACGMMALTMAFVGETVPKERTGSAMGLLGTIARHHVGSRHSAWSFSWRRFDRSLWLARHLPHQCAAGRAGLRPRLLLPADGSRPCESHSAWFRSSGHGAFGHRSCRLCAGDDHRPRPVRLHQSGAALGLRDRHGAVRSR*