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SCNpilot_expt_1000_bf_scaffold_14444_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(1036..1425)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 129.0
  • Bit_score: 217
  • Evalue 2.70e-54
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000255|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 129.0
  • Bit_score: 217
  • Evalue 1.20e-53
DNA-directed RNA polymerase subunit omega n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=RPOZ_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 129.0
  • Bit_score: 217
  • Evalue 8.60e-54

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Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCCCGCGTCACCGTCGAAGATTGTATCGACAAGGTTGAAAACCGCTTTGACCTGGTGCTCGTCGCCAGCCATCGCGCCCGCATGATCGCATCTGGCCAGCCGATCACCGTTGATCGCGATCGCGATAAAAACCCGGTCGTGGCGCTGCGCGAAATCGCCGATGGCACGCTGCAGCCCGACGATCTCCGGGAGGATCTGATTCACTCGCTGCAGAAGCATGTCGAGGTGGACGAGCCGGAGGCCGAAGTGGTGCCGGCGCTGGCGCCCGCCGGCGAGCAGAGCGATGCGGCTGGCGACGTCCAGTTCGACCGCATGACCGAAGAAGACCTCTTGCGCGGCCTCGAAGGCCTGGTGCCGCCGGCCGAGACCGAAGAAGACGCCGAATAA
PROTEIN sequence
Length: 130
MARVTVEDCIDKVENRFDLVLVASHRARMIASGQPITVDRDRDKNPVVALREIADGTLQPDDLREDLIHSLQKHVEVDEPEAEVVPALAPAGEQSDAAGDVQFDRMTEEDLLRGLEGLVPPAETEEDAE*