ggKbase home page

SCNpilot_expt_1000_bf_scaffold_20209_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(547..1551)

Top 3 Functional Annotations

Value Algorithm Source
fatty acid desaturase; K04712 sphingolipid delta-4 desaturase [EC:1.14.-.-] similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 319.0
  • Bit_score: 365
  • Evalue 2.10e-98
  • rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSU6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 307.0
  • Bit_score: 367
  • Evalue 1.70e-98
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41438.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 307.0
  • Bit_score: 367
  • Evalue 2.40e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGGCGACTGGGGTAGACATGCCGCTTGTGCAGCGCACACAGTTTTCGATCGCAGGACCGATGCAAACCGATTTCTTCCGCATGCCCGGACAGGACCCGCATAAGGCGCGCGCCCGCGCCATCCTGGCGGCGCATCCCGAGGTGCGTTCTCTATTCGGCCGCAATCCTTGGACGGCGGCGATCACGCTGGGGATCGTCGCCGCGCAGACGGTCATCGCCTGCTATCTCGGCACGTTGGGCCTGTCCTATTGGTGGTTGGCTCTGCTGGTGGCGATCAGCGTCGGCGTGTTCGCCAATCATGCGCTCTATGTGGTGATCCACGACGCGACCCACGAGACGGTTTTCCGCAGTCGTTTCCTCAACCGGGTGGTGTTGGTTGTTGCCGATCTGCCCAATGTGGTGCCGGGCGCCATGGGCTTTCGCGGCTATCACCTGCATCATCATTCCGGCCGTAGCCGCTATGACGGTGATCCCGATCTGCCGAACGAATGGGAAGCGCGGCTGGTGAAGAACATCTGGTGGCGCAAGGCGATCTGGCTGTTCTGCTTTCCCTTCCTGCAGATTTCCCGCGTGCATCGCGTGCCGCCGGTCAATCTGTTCAGTGGCTGGGCCATCGCCAATTACGTCGCCTGTGCCGCCTATGCCGGGGCGATCTGGTATTTTTTTGGCCTCAACGGCGTCGTCTATCTGTTCGCCTGTTTCTGGTTTTCAACCGGCCTGCATCCGCTGGGTGCCCGCTGGATTTCCGAGCATTACACGCTCGACCCCAACCAGGACACGTCGAGCTATTATGGCCCGGTCAACAAAGTGGCGCTGAATATCGGCTACCACAACGAGCACCACGACTTCCCGCGCGTGCCCTGGAATCGCCTGCCGGAACTGCGGGCCATGGCGCCGGAATTTTACGACAATCTGGCCGTCCACACCTCCTGGACCCGGCTTTTCGTCGATTTTCTGTTCGATCCCCGCTACACGCTGTTCGCGCGGGTGGTTCGGACGGCCTGA
PROTEIN sequence
Length: 335
MATGVDMPLVQRTQFSIAGPMQTDFFRMPGQDPHKARARAILAAHPEVRSLFGRNPWTAAITLGIVAAQTVIACYLGTLGLSYWWLALLVAISVGVFANHALYVVIHDATHETVFRSRFLNRVVLVVADLPNVVPGAMGFRGYHLHHHSGRSRYDGDPDLPNEWEARLVKNIWWRKAIWLFCFPFLQISRVHRVPPVNLFSGWAIANYVACAAYAGAIWYFFGLNGVVYLFACFWFSTGLHPLGARWISEHYTLDPNQDTSSYYGPVNKVALNIGYHNEHHDFPRVPWNRLPELRAMAPEFYDNLAVHTSWTRLFVDFLFDPRYTLFARVVRTA*