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SCNpilot_expt_1000_bf_scaffold_22796_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(1887..2468)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate-binding component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8N2_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 191.0
  • Bit_score: 141
  • Evalue 1.20e-30
ABC transporter, substrate-binding component similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 191.0
  • Bit_score: 141
  • Evalue 3.70e-31
ABC transporter, substrate-binding component {ECO:0000313|EMBL:CBS85798.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 191.0
  • Bit_score: 141
  • Evalue 1.60e-30

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Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
GTCGGCTCAAGCTATCACCTCAAGTTCGTCACTCTGGCGAAGAAGAACGGCGTGGATATCGCGAAAGTTACCTTTGTGCCGCTGCAGTCCCTGCAGAACCAAGCGGCCGCTTTCGCCGGCAACCAAGTCGATGCAGCATCCTTGCCGGCACTGGTGGCGGAGAATTTTGTGAAATCGGGGCAGGGCCGACTTATGGGCTGGGCCGGCGATGAGACGCCTTCCCAGAATGGCGTCGTCGTGGCGTCACCGGCGACCATAGAAAAGCGGCGGGTTCTGATCGAGAAATTCTTGCGCGCCTATAACCAGAGCGTTGCTTTATATTATGACAGTTTTCTGGGTCGCGCCGACGAACGTTCTGCTTCGTTGGCGCAGCAGCAGATGTTGGAAACCATCGCGCGCTATGTTCAGTCCACCCCCGAGAATTTGAAAAGCGCCATGCCTTACTACGATCGGCAACCTGAGGTGGATGTTGCGGACATGAGCCGTCAATTGGCCATCTGGCAAGAGCTGGGGATGGCGCCCAAGTCGGCTGACATTAAAACGATGGTCGATTTATCTTTCAATCACGGCACTTCTGAATAG
PROTEIN sequence
Length: 194
VGSSYHLKFVTLAKKNGVDIAKVTFVPLQSLQNQAAAFAGNQVDAASLPALVAENFVKSGQGRLMGWAGDETPSQNGVVVASPATIEKRRVLIEKFLRAYNQSVALYYDSFLGRADERSASLAQQQMLETIARYVQSTPENLKSAMPYYDRQPEVDVADMSRQLAIWQELGMAPKSADIKTMVDLSFNHGTSE*