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SCNpilot_expt_1000_bf_scaffold_21462_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 1464..2042

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JHE6_ANAD2 similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 162.0
  • Bit_score: 186
  • Evalue 2.40e-44
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 162.0
  • Bit_score: 186
  • Evalue 7.60e-45
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KJK25138.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 186
  • Evalue 2.60e-44

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Taxonomy

Burkholderiaceae bacterium 16 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCCGGATCTGGTCGCCATTTTCGAGCAATATCGCAGGCATGTGAGGGGCTTGGCCTATCGCATGCTGGGCACGCGGACAGAAGCCGAGGACGTCGTGCAAGACGTGTTCCTGCGCTGGCTGCAATCCGACGTGGCGGAAATCCGATCCCCGAAAGCCTGGCTCACGTCGGTGACGACACGGATCTGCATCGACCGGCTGCGCCATCTCGAGGTGGAGCGGGCCGCCTACCCCGGCGTCTGGCTGCCGGAGCCGATCGTCGAGCCAGTTGACCGCGACGTCGAGCGTCGCATGGACCTTTCATCGGATTTGTCGGTCGCCTTCATGATCGTGCTAGAGCGGCTGTCGCCCGACGAGCGCACCGTGTTCGTTTTGCGCGATGTCTTCGATGCCAGCTTTTCCGAAATCGCAGCCATCCTCAACAAGAGCGAGGTCGCCTGTCGGCAGATCGCCAGCCGCGCCCGCGCCAAGGTGCGGGAGGGACGGCCGAAGTTTCAGGTGACGGCGCATATGTCGCCGCCATTGAAGCCGGCGACAAGACGGCCCTGCTCTCCCTGCTCGCCGATGATGCGGTGCTGA
PROTEIN sequence
Length: 193
MPDLVAIFEQYRRHVRGLAYRMLGTRTEAEDVVQDVFLRWLQSDVAEIRSPKAWLTSVTTRICIDRLRHLEVERAAYPGVWLPEPIVEPVDRDVERRMDLSSDLSVAFMIVLERLSPDERTVFVLRDVFDASFSEIAAILNKSEVACRQIASRARAKVREGRPKFQVTAHMSPPLKPATRRPCSPCSPMMRC*