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SCNpilot_expt_1000_bf_scaffold_21462_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 2036..2347

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, TIGR02957 family n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CHN6_BURPE similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 92.0
  • Bit_score: 66
  • Evalue 2.60e-08
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 92.0
  • Bit_score: 66
  • Evalue 8.00e-09
RNA polymerase sigma-70 factor, TIGR02957 family {ECO:0000313|EMBL:ABN92399.1}; TaxID=357348 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1106a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 92.0
  • Bit_score: 66
  • Evalue 3.60e-08

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Taxonomy

Burkholderia pseudomallei → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
GTGCTGAAGTCCGACGGTGGCGGCAAAGTGCGGGTTTCGACCTCGGGCATTTTCGGCGCCGAGAAGATCGTGCGGCTGATCCTGTCGCGCGGGCTCATTCCGCGTGGCTCGCTCAAGGAGGACACGCTCGTCGAGCGCAAGCTCGGCTCGATCAACGGCGAGACGGGCATTCTCGCCTTCGTCGACGATGCACTGATCGCCACTCTGTCCTTCGAGACGCGCGGCGAGCGCATCAAAGCGATCTATCAGGTCTACAATCCCGACAAGCTCGCGCATGTGGCGCAGCCAGATCACGACATCCAGATCGCTTGA
PROTEIN sequence
Length: 104
VLKSDGGGKVRVSTSGIFGAEKIVRLILSRGLIPRGSLKEDTLVERKLGSINGETGILAFVDDALIATLSFETRGERIKAIYQVYNPDKLAHVAQPDHDIQIA*