ggKbase home page

SCNpilot_expt_1000_bf_scaffold_26138_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 2..616

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003704C4B similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 203.0
  • Bit_score: 181
  • Evalue 1.10e-42
Lipopolysaccharide biosynthesis protein WzxC {ECO:0000313|EMBL:ESS66173.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 194.0
  • Bit_score: 180
  • Evalue 2.00e-42
polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 196.0
  • Bit_score: 120
  • Evalue 7.10e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methyloglobulus morosus → Methyloglobulus → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
TTCCGGCGCTTCTTCCTCAAGGGTTATTCACTGGTGGTGACCCTGACATTGCCGCTGGCGATGATATGCGGGCTCTTCGCCGACGATCTGATCGCGGTGGCGCTGGGTCCGCAATGGGGTGGCGCGGTTGGAATATTCAGGATTCTTGCGCCGACGATCCTGGTGGTCGCCATTTCCAGCCCGCTGGGATGGCTGCTCAATGCGCTCGGTCTCGTCAGGCGGGGCGTCTATATTGGACTGTTCTCGGCGCCGCTGATGATTACCGGCGTGCTGATCGGGCTGCCTTATGGGCCGCGCGGCGTCGCGGTGGCGTATTCCACTGTGATGGTGCTCAAGGTGATTCCGGTTGTGCTTTGGGCGTTGCATGGCACGGGGCTTCGCGCCCGCGATATCGCCGGCGCGTTGGCCAGCCCGTTAGCTGCGAGCGTGATCGCTGCCGGTATCGCGTTCGGAATACATGCCCTGTATCCGTCGAGTTTGTCTCCGGTGCTGCGCCTGCTGTTGGATGTCGGCATATTTGGCGGGGCCTATGTGATAGCCCTGCTTTTGATTGCGGGCGAGAAGGCGCTGTATCTCGATCTCTTCCGTGCGGCGAGAGCCGCTTCCTCCGCCTGA
PROTEIN sequence
Length: 205
FRRFFLKGYSLVVTLTLPLAMICGLFADDLIAVALGPQWGGAVGIFRILAPTILVVAISSPLGWLLNALGLVRRGVYIGLFSAPLMITGVLIGLPYGPRGVAVAYSTVMVLKVIPVVLWALHGTGLRARDIAGALASPLAASVIAAGIAFGIHALYPSSLSPVLRLLLDVGIFGGAYVIALLLIAGEKALYLDLFRAARAASSA*