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SCNpilot_expt_1000_bf_scaffold_26138_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 739..1308

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 173.0
  • Bit_score: 200
  • Evalue 6.50e-49
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000315F058 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 176.0
  • Bit_score: 261
  • Evalue 5.80e-67
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIJ34387.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 183.0
  • Bit_score: 204
  • Evalue 1.20e-49

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGCACTTCACTAAGACCGGGGTTCTCGGGGCTATGGTGATTGATCCTGCTCCGCATGCCGACACGCGCGGGCGCTTCATGCGCGCATGGTGCCTGCGGGAGTTCGCCGATCAAGGCATCGTCTTCAATCCGGTCCAGGCGAATATGGGATTCAGCACGAAGCGCGGCACGCTCAGGGGCATGCATTTTCAAGCGCCTCCGGCCAGCGAGGCAAAGCTTGTCCGCTGCACGCGCGGAACGATGTTCGAAGTCGTTTTGGATCTGCGACCCGATTCACCGACTTATCGCGCGTGGCATGGCGTGGAGTTGAGCAGCGACAACGGGCGCATGCTCTATTTTCCAGAAGGCTGCGCGCATGGATACCAGACGCTCGAGGCCGATACTGAGATGCTCTACATGACCTCGGCTTTCTATGCTCCAGCGGCGATTAGGGGCGCGCGCTTCGACGATCCGGCCTTTGGCATCGCATGGCCTTTGGCCCTGAGCGATATCTCCGAGCAGGATCGAAACTGGCCACTCACAGAGCGATGCTTCGATCCTCTCCCGGCAAAGCAATCTTTGATGGCTTGA
PROTEIN sequence
Length: 190
MHFTKTGVLGAMVIDPAPHADTRGRFMRAWCLREFADQGIVFNPVQANMGFSTKRGTLRGMHFQAPPASEAKLVRCTRGTMFEVVLDLRPDSPTYRAWHGVELSSDNGRMLYFPEGCAHGYQTLEADTEMLYMTSAFYAPAAIRGARFDDPAFGIAWPLALSDISEQDRNWPLTERCFDPLPAKQSLMA*