ggKbase home page

SCNpilot_expt_1000_bf_scaffold_31180_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 402..1442

Top 3 Functional Annotations

Value Algorithm Source
GGDEF domain protein n=2 Tax=Burkholderia thailandensis RepID=Q2T898_BURTA similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 335.0
  • Bit_score: 189
  • Evalue 5.10e-45
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 335.0
  • Bit_score: 189
  • Evalue 1.60e-45
GGDEF domain protein {ECO:0000313|EMBL:ABC34239.1}; TaxID=271848 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 /; CIP 106301).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.8
  • Coverage: 335.0
  • Bit_score: 189
  • Evalue 7.20e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia thailandensis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGCCATCCCACGTTCAAGACCTCGTATCTGCCTCCCAGGACCATCGTCCCTTTCGTGCAGTCAGGATCCTCGCGGTGCTGGCTGGGCTTGGGCTTCTTGCTTTCTTTTCGCATGTCCTGATCGATGCACGCCGCGACACGTTGCGCTTTGCCGCGCAGGCCGATGCGACGCTGACGCGCGCCATCGCGCAAGACATCGGCATAGCTTTCGAAGGCTACGATCTGTCGCTTAAGGGCGCGCGCCTCGCACTCACCGAGCCCGATTTCTCCAGCGCCGGCGACGTCATTCGCCAGCTCGCGTTGTTCGACCACTCGACCAATGCCCGCTATTTGAACCGCGTGGCGATCGTCAATGCCGATGGCAAGATCGTCGCCGACTCCTTTCGCAGCAATCCGCTGCCCACCGACACTCTCTCGGGCGAGGATTTTTTCACCGTCCAGCGCGACGCCACCGACGATGCGCTATTCGTCAGCAAGCCGTTGCAGCTACGCCTCGACAGTGGCGAATGGTCCCTGGTGCTCAGCCGCCGCATCAGCCGTGCCGACGGCACATTCGGCGGTATCGTCATGTGCAGCATCAACCTGAACTATTTTCAGGCGATGTTCCTCAATCTCGATATCGGCGACCAGAGCCGCTTTTCCATTTTCGGCACCGACGGCACGATCTTCACGCGGCAACCGTTCCGCCTGACCGACATCGGCAAAAAGATCGGTCCCAACGAACTCTTCAAACATTATCCGGCCAAGCTCTCCGGCAGTTTCGAGAGTGTCTCGGCGCGCGATGAGACCGAACGCGTTCTGACCTATGCGCGGATCGCCAATCTGCCGCTGATCGTGGTGGTGAGTTCGTCCAAGGCGCATATTCTGGCCGGCTGGCATCAGAAGGCCATAGTCATGGCCACGGTTCTCATCCTGCTGCTCGTCGCCTTGGCGGCGGCAGGTGTGCTGCTGTCGCGGGAATTTCGTCTGCGCCGCAGGGTTGAAATGAAAATGGCCGTGCTCGCCACGCGCATGGCCCATATGGCGACGCGCGACAGCTTG
PROTEIN sequence
Length: 347
MPSHVQDLVSASQDHRPFRAVRILAVLAGLGLLAFFSHVLIDARRDTLRFAAQADATLTRAIAQDIGIAFEGYDLSLKGARLALTEPDFSSAGDVIRQLALFDHSTNARYLNRVAIVNADGKIVADSFRSNPLPTDTLSGEDFFTVQRDATDDALFVSKPLQLRLDSGEWSLVLSRRISRADGTFGGIVMCSINLNYFQAMFLNLDIGDQSRFSIFGTDGTIFTRQPFRLTDIGKKIGPNELFKHYPAKLSGSFESVSARDETERVLTYARIANLPLIVVVSSSKAHILAGWHQKAIVMATVLILLLVALAAAGVLLSREFRLRRRVEMKMAVLATRMAHMATRDSL