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SCNpilot_expt_1000_bf_scaffold_35353_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(1..282)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HSV1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 96.0
  • Bit_score: 120
  • Evalue 1.00e-24
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CPR20243.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 93.0
  • Bit_score: 126
  • Evalue 2.60e-26
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 84.0
  • Bit_score: 109
  • Evalue 7.50e-22

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 282
GTGCAGGAAGTCGAAGGGCGACTGAAGACACTGATGGTTCAGAGTCTGGCAGGAGATGAGCGGGCGTATCGAGCGCTGTTGGACGACGTCGCCCGACAATTGCGGAGCTACTACGGACGCCGGCTACGTGAGCGCGCGGCGATCGACGATCTTGTTCAGGAGACATTGATCGCTGTTCACACCCGTCGTTCGACCTATGACAGCGGGCGTCCCTTCACCGCATGGCTCTATGCGATCGCCCGGTACAAATTGATCGACTACATGCGCGCCAACAAGCTGCGG
PROTEIN sequence
Length: 94
VQEVEGRLKTLMVQSLAGDERAYRALLDDVARQLRSYYGRRLRERAAIDDLVQETLIAVHTRRSTYDSGRPFTAWLYAIARYKLIDYMRANKLR