ggKbase home page

SCNpilot_expt_1000_bf_scaffold_52933_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(1..759)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003671F45 similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 252.0
  • Bit_score: 326
  • Evalue 2.60e-86
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFH10153.1}; Flags: Fragment;; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 253.0
  • Bit_score: 254
  • Evalue 1.30e-64
sensory box/GGDEF family protein similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 254.0
  • Bit_score: 236
  • Evalue 8.40e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseomonas cervicalis → Roseomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
GTGGCGCACCACGACGCTTTGACCGATCTGCCCAATCGCGTCTCGCTCATCGAGAGCATGCGCAAGATGATCACCCGTTCGCGGCGCGGCGATCATATGTTCGGCCTCTATGTGGTCGACCTCGACGGTTTCAAGAAGATCAACGATCTTCTCGGCCATGCGGCGGGCGATCGCTATCTGAAGGCGCTGGCGGAGCATGTCAGCAAGGAAATCCGCGAAGGCGATGTCTTGGCCCGCCTCGGTGGCGACGAGTTCGCCTTGTTGCAGTCGGACATGCTTTCGACGACGGAAGCGGCCGATTACGCCAATCGCATTCTCGATACGATCTCCGGTTTCGAAATGCCGGGGCACAATCTGGCGCCGATGAAGGCGTCGATCGGCGTGGCGCTTTATCCTTCCGATGCGACGGATGCGGATCAATTGTTGATCAATGCCAGCCTGGCCATGTATCGCGCCAAATCGGACAACGGCAACAGCTTCGCCTATTTCGCCTCCGACATGCAAACGCGGGCGCGCGTGGCGGCGCAGCTCGACAACGAATTGCAATTGGCGCTCGAACGCGGCGAATTCCAGCTCTACTATCAGCCGCAGATCAATCTCGCGACGGGGCAGGTTGACGGCGCCGAGGCACTGCTGCGCTGGGATCGCCCCGGCCAGGGTATCGTCTCGCCGGGTGTCTTCCTGCCGCGGGCGGAAGAAAACGGCATGATCCTGCCGATCAACGAATGGGTGTTGTTCGAGGCGTGTCGCGCCGCGCGG
PROTEIN sequence
Length: 253
VAHHDALTDLPNRVSLIESMRKMITRSRRGDHMFGLYVVDLDGFKKINDLLGHAAGDRYLKALAEHVSKEIREGDVLARLGGDEFALLQSDMLSTTEAADYANRILDTISGFEMPGHNLAPMKASIGVALYPSDATDADQLLINASLAMYRAKSDNGNSFAYFASDMQTRARVAAQLDNELQLALERGEFQLYYQPQINLATGQVDGAEALLRWDRPGQGIVSPGVFLPRAEENGMILPINEWVLFEACRAAR