ggKbase home page

SCNpilot_expt_1000_bf_scaffold_31399_1

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

partial RP 7 / 55 BSCG 12 / 51 ASCG 4 / 38 MC: 2
Location: 37..1434

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 473.0
  • Bit_score: 824
  • Evalue 1.00e-235
Transcription termination factor Rho n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E206_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 475.0
  • Bit_score: 799
  • Evalue 1.50e-228
rho; transcription termination factor; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 516.0
  • Bit_score: 476
  • Evalue 1.20e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
GTGGAGTCCCTCTCCGAGATCCAGACCGAGAACACCGAGAACGTCGAGAGCGCGCAAGCCACCGGCGTCGAGGAGAACACCGCCGAGGCGACCCCGGTCGCCGAGAGCACCGAGACCGCTGAGGTCGAGGCTCCCGCCGAGGAGTCCGCCGCCGCTGCCGCCGAGGCCGTTCAGACCGAGGCCCCCGACGTGGAGGTGCCGTCGGATGCCGAGGCTCCCGCCGCCGCCGAGGTCGAGCCCGCCCCCGTGGAGGCTGAGCCCGCCCCCGTGGAGGCTGAGCCCGCTGCGGCGGAGGCGGCGCCGGTCGTTCCCGAGGAGAAGCCAGCGAAGGCTCCCCGCAAGCGTGCGCCGCGCCGCGCGAAGAGCGCCGACGTCGCGCCCGCTGAGGATGCCGCCACGGACGCGGTGACCGAGACCGCTGCCGCCGCGCAGGACCCGGCAGAGTCCGCCGCTTCGACGCCGACGGCGGCCGACGAGACCCCCGCGGCCGAGGCTGCGGCCGAGACTCCTGCCGCCGACGCCGCCGAGACCGCCGCCGACGCCGCCGAGACCGCCGCCACCGGCGACGCGTCGGGTGCCGAAACGACGGACAGCGCCGCGGCAGACGCGGCAGGCGCCGCCGAGGGCGAGACCCCCAGCCGCAGCCGCTCGCGCAGCCGCAGCCGCAGCCGCAACCGCGGTCAGCGCGGCGAGAACGGCCAGAACGCTCAGGGTGCGCAGAACGCCCAGAACAACGCTCCGGCCGCTCCGGCCGCCGAAGAGAGCGCAGACGGCGACGACGAGCAGGCCCAGGGCCGCGGTCGCCAGCGCAACAAGCGTCGGGGCCCGGCGCAGAACGGCGACGAGTTCGAAACCGAGATCGGCGAGGACGACGTCCTCATCCCGATCGCCGGCATCCTCGACGTCCTCGACAACTACGCTTTCGTGCGCACCACCGGCTACCTGCCGGGGGCGAGCGACGTCTACGTGTCGCTCGGCCAGGTCAAGAAGTACAACCTGCGCAAGGGCGACGCCGTCGTCGGCGCCATCAAGCAGCCGCGCGAGGGCGAGCAGTCCAGCCGCCAGAAGTACAACGCGCTGGTCAAGGTCGACGCCATCAACGGGCTGTCGGTCGACGACGCCGCCGAGCGTGTCGAGTTCGGTAAGCTCACCCCGCTCTACCCGCAGGAGCGCCTGCGCCTGGAGACGGCGCCGGAGAAGCTCACGCAGCGCATCATCGACCTCGTCGCGCCCATCGGAAAGGGCCAGCGCGGCCTCATCGTCGCGCCGCCCAAGGCCGGCAAGACGATCGTGCTGCAGCAGATCGCCAACGCGATCGCGACGAACAACCCCGAGGTCCACCTCATGGTCGTGCTCGTCGACGAGCGTCCCGAAGAGGTCACCGACATGCAGCGGACC
PROTEIN sequence
Length: 466
VESLSEIQTENTENVESAQATGVEENTAEATPVAESTETAEVEAPAEESAAAAAEAVQTEAPDVEVPSDAEAPAAAEVEPAPVEAEPAPVEAEPAAAEAAPVVPEEKPAKAPRKRAPRRAKSADVAPAEDAATDAVTETAAAAQDPAESAASTPTAADETPAAEAAAETPAADAAETAADAAETAATGDASGAETTDSAAADAAGAAEGETPSRSRSRSRSRSRNRGQRGENGQNAQGAQNAQNNAPAAPAAEESADGDDEQAQGRGRQRNKRRGPAQNGDEFETEIGEDDVLIPIAGILDVLDNYAFVRTTGYLPGASDVYVSLGQVKKYNLRKGDAVVGAIKQPREGEQSSRQKYNALVKVDAINGLSVDDAAERVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIATNNPEVHLMVVLVDERPEEVTDMQRT